Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3495 ATGGCCAATAACAACCCTTCCGACGCTCCCGCCGCCGATGACTTCCTCGAACAAATCCTCAGTCTTCAGACCTTCGCTTCCGCCGATTCTGGATTAACCGGACCCGACGTCGGCCTTACCGGAACTTCTCCGATGATGCTTCAGCTCAACTCCTCCGACGGTAACCATCACCTCGCCGCCGGAGGTTCCTTTCATGCGCCGGTGTATCACCAATTAGGTTTGAGCTTGGACCAAGGTAAAGGAGGATTCTTGAAACCTGAGGAAGCTTCTGGTAGTGGTGAACGCTTTCGCAACGACGTCGTTCATGGTAGACCTAATAATGTTTTTCATGGGCAACCCATGCATACTAATGTTCCTGCTGCTCCACATCCTCCAGCCATGCGTCCTAGGGTGCGGGCTAGAAGGGGACAGGCTACAGATCCACACAGCATAGCTGAGAGATTACGCAGAGAAAGAATCGCAGAAAGAATCAGGGCGCTGCAAGATTTGGTTCCAAGTGTCAACAAGACAGATAGAGCTGCCATGTTAGATGAAATTGTGGATTACGTCAAGTTCTTAAGGCTTCAAGTGAAGGTTTTGAGCATGAGTCGATTGGGCGGAGCAGGTGCAGTGGCACCACTGGTAACTGACATCCCATTATCATCAGTCGAGGAAGAAGGCAGTGAAGGTGGAAGAAACCGACCGGCTTGGGACAAGTGGTCGAATGATGACACAGAAAAACAGGTAGCTAAGCTTATGGAAGAAAATGTTGGAGCTGCTATGCAACTGCTTCAATCAAAGGCGCTTTGCATCATGCCAATCTCCCTGGCATCAGCAATATACCAGTCACAGCCACCAGACAGCTCTAGTATAGTCAAGCCGGAAACCAATCCTCCCTCATAG 882 0.5034 MANNNPSDAPAADDFLEQILSLQTFASADSGLTGPDVGLTGTSPMMLQLNSSDGNHHLAAGGSFHAPVYHQLGLSLDQGKGGFLKPEEASGSGERFRNDVVHGRPNNVFHGQPMHTNVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQDLVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVEEEGSEGGRNRPAWDKWSNDDTEKQVAKLMEENVGAAMQLLQSKALCIMPISLASAIYQSQPPDSSSIVKPETNPPS* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3495 293 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 135 196 IPR036638 GO:0046983
Tpr6g3495 293 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 8 282 - -
Tpr6g3495 293 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 8 282 - -
Tpr6g3495 293 SMART finulus 143 192 IPR011598 GO:0046983
Tpr6g3495 293 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 137 186 IPR011598 GO:0046983
Tpr6g3495 293 Gene3D - 132 194 IPR036638 GO:0046983
Tpr6g3495 293 Pfam Helix-loop-helix DNA-binding domain 142 186 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3495 Tpr-Chr6 37790297 37794459 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3495 64 292 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 78.390 6.40e-115 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Tpr6g3495 HLH 1.2e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3495 - - gmx:100797789 452.21