Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3487 ATGGTGGTTACTGTGTCTGAAGTTGAGCTTAAAGTTCAAGCTATGAGCAAAAAGAAAACTACTATTTCAAGAAGCTGGATTTTGCTAAACCGTGATGGAAGAGAAACAGTATTAGATGTTGATAAGTATGCTATTATGCGTCTTGTTGAAATTCATGCAAGAGATCTTCGAATTATGGATCCTCTTCTTTCATATCCTTCAACCATTCTTGGAAGAGAGAAAGTCATTGTTCTTAATCTAGAGCATATAAAAGCTATTATTACTGCTGAAGAGGTATTGGTTAGAGACCCATTGGATGATGATGTTGTGCCGGTTGTGGAAGAGCTAAGAAGAAGGTTACCACTTAGGGTAAGTGGTCAAGGACAAGGAGAAGAAGAATCATGTGCTCAAGATAGTGAAGAAAATGAAATTCCATTTGAGTTTCGTGCTTTGGAAGTTATATTAGAGGGAATTTGTAGTTTCCTTGATGCACGAACAAAAGAGTTAGAGACTGCTGCCTATCCTGCTTTGGATGAACTAACCTCTAAGATCAGCAGTCGTAATTTGGATAAAGTACGAAAATTAAAAAGTGCAATGACTAGGTTGACCAATCGTGTTCACAAGATAAGGGAGGAATTAGAAAACCTACTTGATGATGATGACGACATGGCTGAACTTTACTTATCAAGAAAGTTAGCTGTTTCATCCTCTCCCTCAAGTAATAATTCTGATGGTCCCAATTGGCATCATAGTCCAAATCAAAGTTCAAAAAGACACAAATCAAGCAGAGGAAGTGCAACAACACTTCAAGAGGAAAATGATGTTGAAGAGCTTGAAATGTTACTAGAGGCCTATTTCATACAAATTGATGGCACATTAAATAAATTGACCACGGTACGAGAATATATTGATGATACAGAAGATTACATCAACATACAGCTTGATAATCACAGGAATCAACTGATTCAGTTAGAGCTGTTCCTAAGTTCAGGGACTGTTTGTTTTTCCATATATTCATTGGTGGCTGCAATATTTGGTATGAACATTCCATATACATGGAATAAGGATCACGGATATGTATTTAAATGGGTGGTGATTCTTACGGCAATGTTTTGTGGATCATTCTTTTTGTCCATAGTATCGTATGCTCGACGCAAAGGTCTTGTTGGGTCTTGA 1155 0.3714 MVVTVSEVELKVQAMSKKKTTISRSWILLNRDGRETVLDVDKYAIMRLVEIHARDLRIMDPLLSYPSTILGREKVIVLNLEHIKAIITAEEVLVRDPLDDDVVPVVEELRRRLPLRVSGQGQGEEESCAQDSEENEIPFEFRALEVILEGICSFLDARTKELETAAYPALDELTSKISSRNLDKVRKLKSAMTRLTNRVHKIREELENLLDDDDDMAELYLSRKLAVSSSPSSNNSDGPNWHHSPNQSSKRHKSSRGSATTLQEENDVEELEMLLEAYFIQIDGTLNKLTTVREYIDDTEDYINIQLDNHRNQLIQLELFLSSGTVCFSIYSLVAAIFGMNIPYTWNKDHGYVFKWVVILTAMFCGSFFLSIVSYARRKGLVGS* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3487 384 Coils Coil 185 212 - -
Tpr6g3487 384 Gene3D Magnesium transport protein CorA, transmembrane region 105 314 - -
Tpr6g3487 384 Gene3D Magnesium transport protein CorA, transmembrane region 321 380 - -
Tpr6g3487 384 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 320 370 IPR045863 -
Tpr6g3487 384 Pfam CorA-like Mg2+ transporter protein 269 367 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Tpr6g3487 384 PANTHER MAGNESIUM TRANSPORTER MRS2-LIKE PROTEIN 11 384 - -
Tpr6g3487 384 MobiDBLite consensus disorder prediction 229 263 - -
Tpr6g3487 384 CDD Mrs2_Mfm1p-like 26 381 IPR039204 -
Tpr6g3487 384 Gene3D - 9 97 - -
Tpr6g3487 384 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 11 384 IPR039204 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3487 Tpr-Chr6 37665067 37672018 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3487 18 357 MRS2 Gene Family AT5G64560 72.286 7.91e-158 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3487 K16075 - gmx:100799368 533.102