Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3477 ATGATGATATCTTCCATTTTCTTCTTTTCTCTTGTTTTCTTTCTTTCTTCTTACTTTTTCTTCAAACAAGAACAAGTTTTCCATTTCTTCTTATCACTAAATGATAACCTACTTCCATATATCTTATCTCTTCTCTTATTTCCCATTCTCTTCTTCTTCTTAACAAAACCAAACAAAAATGATTCAACCATAACCATCCCAAAATCATATCCAATAATCGGTTCTTACTTATCCATCAGAAAATACATGTCCGGTAACCGCCGTATCCAGTGGCTCTCCGACATCATTCAAATCGCACCATCCGCCACTTTCCGTCTCGACCGTCCATTAGGCACTCGTCAAATCATCACCGGAAACCCATCCAATGTTCAACACATACTCAAAAACCAATTCAACAATTACGAAAAAGGTTCACGTTTCACAACTACTCTCTCAGATTTCTTAGGCAACGGAATCTTCAACACAGACGGTGAAAATTGGAAGTTTCAAAGACGAGTAGCAAGTCACGAATTCAACACGAAATCACTTCGGAATTTCGTCGAACACATAGTAGACACGGAACTCACCAACCGTTTAATCCCAATTCTAAACTCATCTTCTCAAACAAACAAAACTCAAACTCTCGATTTTCAAGATATTCTTCAACGTTTCACGTTTGATAATATCTGTAAAATCGCGTTTGGTTTTGATCCAGAATATTTAACGCCGTCAACTAACAGAACGAAATTCGCACAAGCTTTTGAAGATGCAAATGAAATAAGCAGTAAACGTTTTCGTTTAGCGTTACCGATAATCTGGAAGTTGAAAAAACGATTTAACATCGGTTCAGAAAAGCGTCTTAGAGAAGCTGTTAAAGAAGTACACGAATTTGCGAGAAAAATAATTCGTGACAAAAAACAAGAATTGCACGAAAATTCAAGTATCCAATCGGAAGATATGTTATCGCGTTTTTTAAGTTCGGGTCATTCGGAAGAAGATTTCGTAGCGGATATTATAATTAGTTTTATTTTAGCGGGTAAAGATACCACCTCAGCGGCACTGACGTGGTTTTTTTGGTTATTATGGAAAAATCCACGTGTTGAGGAGGAAATTTTGAAGGAAATAAATCAATCTGAATCGTTCGATTACAATGAAGTGAAAGAAATGGTTTATACGCATGCGGCACTTAGCGAGAGTATGAGGTTGTATCCACCTGTACCGATGGATAGTAAAGAAGCTGTAAACAACGATGTTTTACCGGATGGAACGATTGTGGAGAAGGGGACTATGGTAACTTATCATGTGTACGCGATGGGGAGGATGGCGAGTTTATGGGGAGAGGATTGGGCCGAGTTTAAGCCCGAGAGATGGTTGGAGAAAGATGGAGTAAGTGGAAAATGGACTTTTGTGGCGAGAGATTCTTTTACATATCCGGTTTTTCAGGCCGGGCCTAGGATTTGTTTAGGGAAGGAAATGGCTTTTATGCAAATGAAAAGGATTGTTGCTGGGATTGTTGGGAAGTTTAAGGTTGTTCCTGAGGCTCATTTGAATGAACATCCTAATTTCATTTCGTTTTTGAGTTCACAGATGGAAGGTGGGTTTCCTGTTACTATTCACAAAAGGGATCATTAA 1611 0.3842 MMISSIFFFSLVFFLSSYFFFKQEQVFHFFLSLNDNLLPYILSLLLFPILFFFLTKPNKNDSTITIPKSYPIIGSYLSIRKYMSGNRRIQWLSDIIQIAPSATFRLDRPLGTRQIITGNPSNVQHILKNQFNNYEKGSRFTTTLSDFLGNGIFNTDGENWKFQRRVASHEFNTKSLRNFVEHIVDTELTNRLIPILNSSSQTNKTQTLDFQDILQRFTFDNICKIAFGFDPEYLTPSTNRTKFAQAFEDANEISSKRFRLALPIIWKLKKRFNIGSEKRLREAVKEVHEFARKIIRDKKQELHENSSIQSEDMLSRFLSSGHSEEDFVADIIISFILAGKDTTSAALTWFFWLLWKNPRVEEEILKEINQSESFDYNEVKEMVYTHAALSESMRLYPPVPMDSKEAVNNDVLPDGTIVEKGTMVTYHVYAMGRMASLWGEDWAEFKPERWLEKDGVSGKWTFVARDSFTYPVFQAGPRICLGKEMAFMQMKRIVAGIVGKFKVVPEAHLNEHPNFISFLSSQMEGGFPVTIHKRDH* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3477 536 Pfam Cytochrome P450 69 509 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g3477 536 Gene3D Cytochrome P450 52 536 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g3477 536 PRINTS E-class P450 group I signature 327 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g3477 536 PRINTS E-class P450 group I signature 347 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g3477 536 PRINTS E-class P450 group I signature 386 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g3477 536 PRINTS E-class P450 group I signature 470 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g3477 536 PRINTS E-class P450 group I signature 480 503 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g3477 536 PANTHER CYTOCHROME P450 42 533 - -
Tpr6g3477 536 SUPERFAMILY Cytochrome P450 67 534 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g3477 536 PRINTS P450 superfamily signature 338 355 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g3477 536 PRINTS P450 superfamily signature 387 398 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g3477 536 PRINTS P450 superfamily signature 471 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g3477 536 PRINTS P450 superfamily signature 480 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g3477 536 PANTHER CYTOCHROME P450 94A2-LIKE 42 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3477 Tpr-Chr6 37541217 37543084 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3477 44 536 Cytochrome P450 AT5G63450 48.111 2.53e-157 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3477 K20769 K13407 ag:AAD10204 806.594
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3477 6 37541217 37543084 Tpr6g3477 6 37541217 37543084 ECH
Tpr6g3477 6 37541217 37543084 Tpr1g2102 1 21948491 21950460 PCT