Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3466 ATGGAGGGAGATAGAAATAATAATGCAGAGGTAAGATACAGAGGAATTCGTAGAAGACCATGGGGTAAATTTGCAGCTGAAATTCGTGATCCAACAAGAAAAGGCACTCGTATTTGGCTTGGAACATTTGATACAGCTGAACAAGCTGCTCGTGCTTATGATGCTGCTGCTTTTCATTTTCGTGGTCATAAAGCTATTCTTAATTTTCCAAATGATTTTGCTCATTCTAGTACTAATTATAATGTTTCAAATACTACTTCAACATCAAATAATACATTAATGTCAAATTCTTCTTCTCTAATTTCCCATCAACAACAAGAAGGTCAAGGTGATGATACTTTTGATGAATTGACTTGCTTGGATAACAAGTTGTTGGAAGAACTCCTTGATGAGGTGCAAGATGATGGTATAGGTAGCTCTAGAAATTGA 429 0.3566 MEGDRNNNAEVRYRGIRRRPWGKFAAEIRDPTRKGTRIWLGTFDTAEQAARAYDAAAFHFRGHKAILNFPNDFAHSSTNYNVSNTTSTSNNTLMSNSSSLISHQQQEGQGDDTFDELTCLDNKLLEELLDEVQDDGIGSSRN* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3466 142 MobiDBLite consensus disorder prediction 89 108 - -
Tpr6g3466 142 ProSiteProfiles AP2/ERF domain profile. 12 70 IPR001471 GO:0003700|GO:0006355
Tpr6g3466 142 CDD AP2 12 72 IPR001471 GO:0003700|GO:0006355
Tpr6g3466 142 Gene3D AP2/ERF domain 11 71 IPR036955 GO:0003700|GO:0006355
Tpr6g3466 142 SMART rav1_2 12 76 IPR001471 GO:0003700|GO:0006355
Tpr6g3466 142 PRINTS Ethylene responsive element binding protein signature 13 24 IPR001471 GO:0003700|GO:0006355
Tpr6g3466 142 PRINTS Ethylene responsive element binding protein signature 36 52 IPR001471 GO:0003700|GO:0006355
Tpr6g3466 142 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF105 6 100 - -
Tpr6g3466 142 Pfam AP2 domain 12 63 IPR001471 GO:0003700|GO:0006355
Tpr6g3466 142 PANTHER DNA-BINDING DOMAIN 6 100 IPR044808 GO:0003700|GO:0009873
Tpr6g3466 142 SUPERFAMILY DNA-binding domain 12 71 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3466 Tpr-Chr6 37434937 37435500 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3466 7 130 AP2-EREBP Transcription Factor Family AT3G23230 53.600 5.26e-39 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Tpr6g3466 AP2 8.7e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3466 - - gmx:100778998 151.754
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3466 6 37434937 37435500 Tpr6g3466 6 37434937 37435500 ECH
Tpr6g3466 6 37434937 37435500 Tpr1g2131 1 22386204 22386887 PCT