Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3460 ATGGCAAAAGAACAAATTCAGGTGCTAAATGCACTTGATGTGGCTAAAACACAATGGTATCATTTCACTGCAATTGTCATAGCTGGTATGGGATTCTTCACTGATGCATATGATTTGTTCTGTATATCCCTTGTTACCAAGTTGCTCGGCCGCATATACTACCACGTTGAGGGTGCGGGAAAGCCCGGTACATTGCCACCCAATGTATCAGCTGCTGTAAATGGTGTTGCTTTCTGTGGAACACTTTTAGGACAGCTTTTCTTTGGCTGGCTTGGGGATAAGTTGGGAAGAAAAAAAGTCTACGGCATGACCCTCATGACGATGATAATCTGCTCTGTTTGTTCTGGCCTTTCTTTTGGACACACTCCAAAATCTGTTATGGCAACTCTCTGCTTCTTCCGCTTCTGGCTCGGGTTCGGTATTGGTGGAGACTACCCTCTTTCCGCTACCATAATGTCAGAGTATTCTAATAAGAAGACTCGAGGCGCCTTCATTGCTGCTGTCTTTGCCATGCAAGGTTTTGGAATTTTGGCAGGTGGTGTATTTGCAATCATAATTTCATCCTTATTCAACACTTGGTTTGAAGCACCATCATATGCGGTTGATCCAGTTCGATCTACTGTTCGACAAGCAGACTACATGTGGAGGATAATTGTGATGGTTGGAGCAATCCCAGCAGCAATGACCTTTTATTCGCGGTCAAAGATGCCAGAAACCGCTCGTTACACCGCTTTAGTTGCTAAGAACACGGCACAGGCTGCAGCAGATATGTCTAAGGTTTTACAGGTTGAGATTGAAGCTGACCAGCAGAAAGATGAGCCAGAAAAAACTAAATCATATGGCTTGTTCTCAAAAGAGTTCTTCAGGAGACATGGAATACATCTACTTGGTACATCAAGCACTTGGTTCTTGCTTGATATAGCATTTTATAGTCAAAATCTCTTCCAGAAAGATATTTTCAGCGCAATTGGTTGGATACCTGCTCCACAAACCATGAATGCAATTGAAGAGGTGTACAAAATTGCGCGAGCTCAAACGCTTATTGCTCTATGCAGTACGGTTCCAGGCTACTGGTTTACAGTGGCTCTCATTGACAGAATTGGGAGATTCAAAATCCAATTGATGGGATTCTTCTTTATGACCGTCTTCATGTTTTCGCTTGCCATTCCTTATGAACACTGGACTCATAAGGAAAACAGAATAGGATTTGTGGTAATGTATTCCTTAACCTTCTTCTTTGCAAATTTTGGGCCTAATGCTACAACATTTGTTGTGCCGGCAGAGATTTTCCCTGCTAGATTCCGATCCACTTGCCACGGAATATCATCTGCATCCGGGAAGCTTGGAGCTATGGTTGGTGCATTTGGGTTCTTGTATTTGGCACAAAACCAGGACAAGAGTAAAGCTGATGCAGGGTACCCTGCAGGTATTGGTGTGAAGAATTCACTGATTCTCTTGGGTGTGGTTAACATTTTGGGGTTCTTGTGTACTTTCATGGTACCTGAGGCAAGTGGAAAATCTTTAGAGGAGATGTCAGGTGAGAATGAAGAGGAAGAAGGAAATAGAGAAGATGTTTAG 1578 0.4309 MAKEQIQVLNALDVAKTQWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVEGAGKPGTLPPNVSAAVNGVAFCGTLLGQLFFGWLGDKLGRKKVYGMTLMTMIICSVCSGLSFGHTPKSVMATLCFFRFWLGFGIGGDYPLSATIMSEYSNKKTRGAFIAAVFAMQGFGILAGGVFAIIISSLFNTWFEAPSYAVDPVRSTVRQADYMWRIIVMVGAIPAAMTFYSRSKMPETARYTALVAKNTAQAAADMSKVLQVEIEADQQKDEPEKTKSYGLFSKEFFRRHGIHLLGTSSTWFLLDIAFYSQNLFQKDIFSAIGWIPAPQTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDRIGRFKIQLMGFFFMTVFMFSLAIPYEHWTHKENRIGFVVMYSLTFFFANFGPNATTFVVPAEIFPARFRSTCHGISSASGKLGAMVGAFGFLYLAQNQDKSKADAGYPAGIGVKNSLILLGVVNILGFLCTFMVPEASGKSLEEMSGENEEEEGNREDV* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3460 525 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-7-RELATED 1 522 - -
Tpr6g3460 525 TIGRFAM 2A0109: phosphate:H+ symporter 11 514 IPR004738 GO:0005315|GO:0006817|GO:0016021
Tpr6g3460 525 Gene3D MFS general substrate transporter like domains 20 525 IPR036259 -
Tpr6g3460 525 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 1 522 - -
Tpr6g3460 525 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 505 IPR020846 GO:0022857
Tpr6g3460 525 SUPERFAMILY MFS general substrate transporter 12 512 IPR036259 -
Tpr6g3460 525 CDD MFS_PhT 25 502 - -
Tpr6g3460 525 Pfam Sugar (and other) transporter 25 512 IPR005828 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3460 Tpr-Chr6 37339443 37343341 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3460 1 513 Inorganic Solute Cotransporters AT2G38940 84.690 0.0 916
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3460 K08176 - gmx:100819445 910.983
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3460 6 37339443 37343341 Tpr6g3460 6 37339443 37343341 ECH
Tpr1g2134 1 22442114 22444381 Tpr6g3460 6 37339443 37343341 PCT