Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3453 ATGGCTTCTCCAAAAGCATCATCACTAAGCAAATACTCTGCTCTAGCATCATATAATATCACCAATATCACTAAATCAATGGCAACTGCTGGTGTGTTTGAAGTTCGTCCTCCTACGATTGCTCCCACTTCCGAACCACCGCCTCTCTTTGATGGAACTACCAGGTTGTACATGAGTTATTCGTGCCCGTTTGCGCAACGCGTATGGATTACTAGGAACTATAAGGGATTGCAAGACAAGATCAAATTGGTTCCTATTGATCTACAGAACAAGCCTGCTTGGTACAAAGAGAAGGTCCACCCAGAAAATAAGGTGCCATCTCTCGAACATGATGGCAAGGTTTTAGCTGAAAGTATTGACTTGATCAAATATGTTGATGCAAATTTTGAAGGACCATCACTAGTGCCTAATGACCCAACCAAGAAGGAATTTGGAGAGGAGTTAATAAAGTATGTTGATACTTTTGTCAAAGATGTGTTTGGTTCGTTCAAGGGTGATCCTGTGACGCAAACAAGTGCTTCATTTGACTACTTGGAGAATGCTCTTGGTAAATTTGATGGGCCATTTTTCCTTGGTGAATTTAGTTTGGTGGATATTGCCTATATTCCATTCATTGAAAGGTTCCAAATTGCATTCTCAGAATTGTATAAGCATGACATCACAGTTGGAAGGCCTAAATTTGCAACATGGATTGAGGAGCTGAACAATAATGATGCTTATAAGCAGACAAAACTTGATAATCCACAACAATTCGTTGGCTTTGTCAAGAAAGTCTCCTTGGGACAGTAG 789 0.403 MASPKASSLSKYSALASYNITNITKSMATAGVFEVRPPTIAPTSEPPPLFDGTTRLYMSYSCPFAQRVWITRNYKGLQDKIKLVPIDLQNKPAWYKEKVHPENKVPSLEHDGKVLAESIDLIKYVDANFEGPSLVPNDPTKKEFGEELIKYVDTFVKDVFGSFKGDPVTQTSASFDYLENALGKFDGPFFLGEFSLVDIAYIPFIERFQIAFSELYKHDITVGRPKFATWIEELNNNDAYKQTKLDNPQQFVGFVKKVSLGQ* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3453 262 Pfam Glutathione S-transferase, C-terminal domain 169 232 - -
Tpr6g3453 262 SUPERFAMILY GST C-terminal domain-like 129 255 IPR036282 -
Tpr6g3453 262 SFLD Main (cytGST) 55 235 - -
Tpr6g3453 262 PANTHER GLUTATHIONE S-TRANSFERASE L1 27 260 IPR044629 GO:0004364
Tpr6g3453 262 Gene3D Glutaredoxin 27 130 - -
Tpr6g3453 262 Pfam Glutathione S-transferase, N-terminal domain 56 132 IPR004045 -
Tpr6g3453 262 PANTHER GLUTATHIONE S-TRANSFERASE TAU 27 260 - -
Tpr6g3453 262 SUPERFAMILY Thioredoxin-like 44 134 IPR036249 -
Tpr6g3453 262 Gene3D - 131 261 - -
Tpr6g3453 262 SFLD Glutathione Transferase (cytosolic) 55 235 IPR040079 -
Tpr6g3453 262 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 52 133 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3453 Tpr-Chr6 37278450 37280869 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3453 27 257 Glutathione S-transferase Gene Family AT5G02790 66.524 1.63e-111 319
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3453 K00799 - gmx:100793025 360.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3453 6 37278450 37280869 Tpr6g3453 6 37278450 37280869 ECH