Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3450 ATGGAAGACTCCCCTGCTGCTTATATCCGCCTGGTGCACCGTTTGATAGAGGAATGTATCTTATTTAACATGAGCAAAGAAGAATGCATGGAAGCTCTTTCCAAGCATGCAAATATCAAACCAGTTATCACCTCCACTGTTTGGAAGGAATTAGAGAAAGAGAATAAGGAGTTCTTCGAGGCATATTTGAACAACAGAGCAGAGAGAGCTTCAGAGACAGAGATGAGGCAAAGGATACGAAACATGGTTTTGGATTCTTCTAAATAA 267 0.4082 MEDSPAAYIRLVHRLIEECILFNMSKEECMEALSKHANIKPVITSTVWKELEKENKEFFEAYLNNRAERASETEMRQRIRNMVLDSSK* 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3450 88 PANTHER ARGININOSUCCINATE LYASE 1 87 - -
Tpr6g3450 88 PANTHER OS02G0137100 PROTEIN 1 87 IPR006476 -
Tpr6g3450 88 TIGRFAM A_thal_3526: uncharacterized plant-specific domain TIGR01589 9 62 IPR006476 -
Tpr6g3450 88 Pfam Plant protein 1589 of unknown function (A_thal_3526) 12 62 IPR006476 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3450 Tpr-Chr6 37258093 37260181 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3450 - - gmx:100785268 141.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3450 6 37258093 37260181 Tpr1g4160 1 48114707 48119907 PCT