Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3442 ATGTGGAGAAGGACTTCAAAAAACACAGCTAAACTGTGGCACTCTATCAAATCAAAAAGGGTAACGGACATCAAAGCTTTTCGACTATTTTATAAAGGTGGAACATCGGAAGTTCATACAAGTGGCGACGCAATAGATGAGCTATTACTATTTGATTTTGAAAAGCTTACAACCGCCACAAATAACTTTGACTTGTCCAACAAACTTGGACAGGGTGGTTTTGGTCCAGTATACAAGGGGAAACTGCAAGATGGTCAAGAAATAACAGTTAAAAGACTTTCTAGAGCATCTGGCCAAGGGCTGGAAGAATTCATGAATGAAGTTGTGGTCCTTTGTAAGCTTCAACACCGTAATCTTGTAAGACTTCTTGGCTGTTGTGTTGACAGTGATGAAAATATGTTGATGTATGAGTACATGCCAAACAAAAGTTTGGATGCATTTATATTTGGTTAG 453 0.3841 MWRRTSKNTAKLWHSIKSKRVTDIKAFRLFYKGGTSEVHTSGDAIDELLLFDFEKLTTATNNFDLSNKLGQGGFGPVYKGKLQDGQEITVKRLSRASGQGLEEFMNEVVVLCKLQHRNLVRLLGCCVDSDENMLMYEYMPNKSLDAFIFG* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3442 150 Pfam Protein tyrosine and serine/threonine kinase 65 148 IPR001245 GO:0004672|GO:0006468
Tpr6g3442 150 SUPERFAMILY Protein kinase-like (PK-like) 44 149 IPR011009 -
Tpr6g3442 150 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-13 39 149 - -
Tpr6g3442 150 ProSiteProfiles Protein kinase domain profile. 63 150 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3442 150 Gene3D Phosphorylase Kinase; domain 1 19 138 - -
Tpr6g3442 150 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 39 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3442 Tpr-Chr6 37194080 37194919 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3442 48 149 Receptor kinase-like Gene Family AT4G04500 64.706 1.69e-39 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr6g3442 PK_Tyr_Ser-Thr 2.9e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3442 - - mtr:MTR_4g098890 210.69