Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3437 ATGGGATTTTGTAACCAAAAAAGGTATGAAATTTGGAAACCATTCATAGCTGTTGTGTTCTTGCAATTTGGATATGCTGGTATGGATGTTCTATCCAAAGTTGCACTTAACAATGGAATGAGCAATTATGTACTGGTCGTTTATCGTCACGCCGTTGCCTTCATTGTGATTGTTCCTTTTGCGGTCATCTTAGAAAAGAAAGTGAGGCCAAAAATGACATTATCAATCTTTATGAAGCTAGTGATTCTCAGTGTGCTAGAGCCAGTTATTGATCAAAATTTATATTTTTTGGGAATGAAGTATACAACAGCTACTTTTGCGGTTGCTATGTTCAATGTTCTTCCAGCCATTACCTTTGTGGTGGCTTGGATTCTCAAACTTGAGAAGATAAAAATGAAGAGTATTCATAGTCAAGCAAAGATTGTTGGGACAGTAGCCACTGTTGCAGGTGCTATGCTTATGACATTGTTAAAAGGTCCAATACTTAATATTTTTGGAATACATGGAAGCAATGCCCAAATTCAACATAATAATGGTGCAAATCTTCAACATGCAATAAAGGGATCAATTATGATCACAATTGGTTGTTTTAGTTGTGCTTGTTTTATGATTCTCCAAGCTATAACACTTGAAACCTATCCTGCTGAGTTATCTCTTACAGCATGGATATGTCTATTGGGAACAATTGAAGGTGGAATAGTAGCTTTGATTATGGAAAGGGGTGAACCTTCGGTTTGGTCTTTGAATTGGGATACAAAACTCTTGGCTGCAGTTTATAGTGGTATAGTTTGTTCAGGAATGGCCTATTACATCCAAGGAGCAGTGATGAGATATAGAGGTCCAGTCTTTGTAACAACTTTCAATCCCCTTTGCATGGTCATTGTAGCTATCATGGGCTCTTTCTTTTTGGCCGAGAAAATTTACCTCGGAAGGGTGATTGGTGCCGTTGTGATTATTTTTGGATTGTATTTAGTGGTATGGGGTAAAAGTAAAGACTATGACACACCAACTCCAAATATTATTGAAGATGAAAATTTAGCAGCTAAGCAAATTACAGAGATTAATGACAAAGAGGAGCATCCTAATCATGAGGTCATGATCACTAGCAAAACCTTTGGTGAAGGAAATAACATAGCAAGAGATGAACAAGTGTGA 1155 0.3714 MGFCNQKRYEIWKPFIAVVFLQFGYAGMDVLSKVALNNGMSNYVLVVYRHAVAFIVIVPFAVILEKKVRPKMTLSIFMKLVILSVLEPVIDQNLYFLGMKYTTATFAVAMFNVLPAITFVVAWILKLEKIKMKSIHSQAKIVGTVATVAGAMLMTLLKGPILNIFGIHGSNAQIQHNNGANLQHAIKGSIMITIGCFSCACFMILQAITLETYPAELSLTAWICLLGTIEGGIVALIMERGEPSVWSLNWDTKLLAAVYSGIVCSGMAYYIQGAVMRYRGPVFVTTFNPLCMVIVAIMGSFFLAEKIYLGRVIGAVVIIFGLYLVVWGKSKDYDTPTPNIIEDENLAAKQITEINDKEEHPNHEVMITSKTFGEGNNIARDEQV* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3437 384 PANTHER WAT1-RELATED PROTEIN 9 352 IPR030184 GO:0016021|GO:0022857
Tpr6g3437 384 Pfam EamA-like transporter family 187 326 IPR000620 GO:0016020|GO:0016021
Tpr6g3437 384 Pfam EamA-like transporter family 16 154 IPR000620 GO:0016020|GO:0016021
Tpr6g3437 384 PANTHER WAT1-RELATED PROTEIN 9 352 - -
Tpr6g3437 384 SUPERFAMILY Multidrug resistance efflux transporter EmrE 233 331 - -
Tpr6g3437 384 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3437 Tpr-Chr6 37135658 37138905 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3437 10 379 Nodulin-like Gene Family AT2G37460 63.073 3.01e-168 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3437 - - gmx:100777050 575.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3437 6 37135658 37138905 Tpr1g4118 1 47295164 47300925 PCT