Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3434 ATGACCTCAGAGGCAGTTCACTTTGTGGATGAACTAGGGTGTTGGCAGTGGAATGTACTGGTTTTTTTCCTCTCTGGAAATACACAGCAGTGGATAGCTTGCAATCTTTGTATTGAAATTGGAGGAAAAACAGTGCTTGAAATATTGCGGAACAACTCCAAATTGGAAGCCCTTTATGCTTATGAAATTTTATATTTCAAGTTATCTGATGTAGCTGTTTGCTCATCAAATTCTTCTTTTTCATTAGCTGTTTGCTCATCAACTTATTCTTCGTTTTCATTTCCTATCATTCTGAAAATTGCCACTGAGCTTGAACTGTGGCAGGAAACCTTTAGATCTGTTGAAGATATACATGGGTTGATGTGCATGGTCAAGAAAACTCCGAAACCATCCTTGATGACGGTTTACTATGTTAAGTTGACTGAAATATTTTGGATATCTTCAAGTCATTTATATCATGCATATGCATGGTTCAAGCTCTTTTTGTTACAAAAAAGTTTCAACAAAAATCTGAGTCAGAAGGATCTCCAGTTAATAGCTTCATCTGTTGTTTTAGCTGCACTTTCAGTGCCTCCTCATGATCGCACTTACAGTGCATCTCATTTAGAGCTAGAGCATGAAAAGGAGCGGAATTTGAGGATGGCTAATCTTATAGGCTTTAATCTTGAAACTAAGCCTGAGAGCAGAGAAATGCTCTCAAGGTCATCACTTCTCGCTGAACTGGCATCAAAGGGTGTGTTGTCTTGTGTTTCACAAGAAGTGAAAGACATTTACTATCTTTTGGAACATGAATTTCTACCCTCGGATCTTGCACTAAAAGTACTACCCTTGCTAAATAAAATTTCAAAATTAGGGGGTAAGTTTACCTTTGCTTCATCAGTTCCAGAGGTGCAATTTTCGCAGTATGTCCCAGCACTTGAAAAGTTAGCTACCTTGAGGTTACTACAACAGGTGTCTAATGTGTACCAAACAATGAAGATTGATAACCTTGCTGGGTTGATCCCTTTCTTTGATTTTTCCGTTGTGGAAAAGATTTCTGTCGATGCTGTTAAGCAGAAATTTCTATCAATGAAAGTCGACCACATGAAAAATGTTGTTATTTTCTGTAAGACGAGTCTTGAGGCTGATGGCTTGAAGGATCACTTGGCTAGTTTTGCTGAACAATTGAATAAGGCAAGGCAATTGATTTGTCCTCCTGATAGGAAACAATCAAAACTTGGAGCCTTGCTCCCGACCTTGTCTGAGGTTGTGGCCAAAGAACACAAGAGGCTCCTTGCTCGGAAATCAATTATTGAAAAGAGGAAAGAGGAACAAGAACGACAGCTTCTTGAAATGGAACGCGAGGAGGAGTCGAAGAAGTTAAGACTGCAGAAAGTTAATGATGAAGCCGAGAAAATACGACTTGAAAAAGAGTCTGAGTTGAGGCGAAAGCAAAGGATCCAAAGGGAAATGGAGGAAAAAGAAAAGGAAGAAGCACGGCTTTTACTTGAGGAACATGAAAAGCGTTTTAAGTTAAAGGGTAAAAAGGCCCCCCCCATAGATAAGGCCAACCTTTCTAGGCAGACCTTGTTACAGATAAGTTTGATTGAACAACAAAAACAGAGACAAGATATTGAGAAGAAACTGCAGAAATTAGCTAAAACCATGGATCATTTGGAAAGAGCAAAGAGAGAAGAGGCTGCTCCACTTATTGAAGCTGCATATCAACAGCGCCTAGTGGAAGAGAGGATTCTTCATGAGCGTGAACAGCAAATGGAGGTTGAACTGAGCAAACAACGTCATGCTGGAGATCTCCATGAGAAGGAGAGGCTTAGTCGAATGATGGGCAATAAAGAGATATATCAAGAGAAAGTTGTCAGTCATCGCCAAGCAGAAACTGATAGACTTAAGAAAGAAAGGGAGGATCGCATCTCTAGGATTTTACAATCCAGAAAACAGGAGAGGGAAAAGATGAGGAAGTTGAAGTATTTTCTTCAGGTTGAAGAAGAGAGACGACAAAAATTGCGTGAGGCAGAAGAAGCTCAGAAGCGTCAAGAGGCAGAGAGAAAAAAGAAGGAACAGCTTGAACACCAAGCAAAATTGGATGCGATAGCTGAAAAGCAGAAGCAAAGGGAAAGAGAAATTGAAGAAAAGGCTGAGAGGGAAAAGAGGGAAGCATTGTTGGGGAGACCTATTGAACCTGCTCTGAGACCTTATGAGCCTCCTGCCCGTCCATTGGAGTCTGGTGCTGCTCCTGCTGCAGCTGCTGCATCCTCAGCTCCAGGGAAATATGTTCCCAAGTTCCGGCGAGGAGGTGCTGATACCACAAGAGCTCCTCCTCCAGAAGCAGATCGTTGGGGCAACAGTAGCAGCAAGCCAGATGGTGACAGGTGGGACCGCAACTCTTCATTTGGTTCTGGCGGGGGTAATTTAAAGGGTCTCTACTTTGATCGCTTCTTAATAGCAAGGAACCTTGGATCAAAGGATGTGTTGTGCCTTAGTGATTCTGAACATGCCTTGGACTTGATTGTTTAG 2514 0.4165 MTSEAVHFVDELGCWQWNVLVFFLSGNTQQWIACNLCIEIGGKTVLEILRNNSKLEALYAYEILYFKLSDVAVCSSNSSFSLAVCSSTYSSFSFPIILKIATELELWQETFRSVEDIHGLMCMVKKTPKPSLMTVYYVKLTEIFWISSSHLYHAYAWFKLFLLQKSFNKNLSQKDLQLIASSVVLAALSVPPHDRTYSASHLELEHEKERNLRMANLIGFNLETKPESREMLSRSSLLAELASKGVLSCVSQEVKDIYYLLEHEFLPSDLALKVLPLLNKISKLGGKFTFASSVPEVQFSQYVPALEKLATLRLLQQVSNVYQTMKIDNLAGLIPFFDFSVVEKISVDAVKQKFLSMKVDHMKNVVIFCKTSLEADGLKDHLASFAEQLNKARQLICPPDRKQSKLGALLPTLSEVVAKEHKRLLARKSIIEKRKEEQERQLLEMEREEESKKLRLQKVNDEAEKIRLEKESELRRKQRIQREMEEKEKEEARLLLEEHEKRFKLKGKKAPPIDKANLSRQTLLQISLIEQQKQRQDIEKKLQKLAKTMDHLERAKREEAAPLIEAAYQQRLVEERILHEREQQMEVELSKQRHAGDLHEKERLSRMMGNKEIYQEKVVSHRQAETDRLKKEREDRISRILQSRKQEREKMRKLKYFLQVEEERRQKLREAEEAQKRQEAERKKKEQLEHQAKLDAIAEKQKQREREIEEKAEREKREALLGRPIEPALRPYEPPARPLESGAAPAAAAASSAPGKYVPKFRRGGADTTRAPPPEADRWGNSSSKPDGDRWDRNSSFGSGGGNLKGLYFDRFLIARNLGSKDVLCLSDSEHALDLIV* 838
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3434 837 MobiDBLite consensus disorder prediction 666 723 - -
Tpr6g3434 837 Pfam PCI domain 233 368 IPR000717 -
Tpr6g3434 837 Coils Coil 528 558 - -
Tpr6g3434 837 Coils Coil 694 718 - -
Tpr6g3434 837 Coils Coil 421 502 - -
Tpr6g3434 837 SMART PINT_4 301 392 IPR000717 -
Tpr6g3434 837 Coils Coil 657 691 - -
Tpr6g3434 837 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT 98 765 IPR027512 GO:0005852
Tpr6g3434 837 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT A 98 765 - -
Tpr6g3434 837 Gene3D - 211 370 - -
Tpr6g3434 837 Gene3D - 129 206 - -
Tpr6g3434 837 MobiDBLite consensus disorder prediction 666 796 - -
Tpr6g3434 837 ProSiteProfiles PCI domain profile. 176 373 IPR000717 -
Tpr6g3434 837 Gene3D UVR domain 96 128 - -
Tpr6g3434 837 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 301 392 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Tpr6g3434 Tpr-Chr6 37106913 37114767 Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3434 43 806 Eukaryotic Initiation Factors Gene Family AT4G11420 60.321 0.0 806
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3434 K03254 - gmx:100803796 964.14