Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3432 ATGACGTCATTTCTGAAGCCTGAGAATGCCCTTAAAAGGGCTGAAGAGTTAATCAATGTTGGGCAGAAGCAGGATGCTCTTCAGACCCTGCACGATCTTATTACTTCGAAAAGATACAGAGCATGGCAGAAAACACTTGAACGGATCATGTTTAAGTATGTAGAGCTGTGTGTAGACATGAGGAAAGGACGGTTTGCTAAAGACGGGCTAATTCAATATCGAATCATTTGTCAGCAAGTTAATGTTAGTTCACTGGAGGAGGTGATTAAGCATTTCATGCACCTGTCAACAGAGAAAGCTGAACAAGCTCGTAACCAGGCTCAGGAATTAGAAGAAGCCCTTGATGTTGATGACTTAGAGGCAGATAAAAGGCCAGAGGACTTGATGCTGAGCTATGTCAGTGGTGAGAAAGGAAAGGATAGATCTGATCGGGAGCTTGTTACCCCATGGTTTAAATTTCTATGGGAAACTTACAGAACAGTGCTTGAAATATTGCGGAACAACTCCAAATTGGAAGCCCTTTATGCTATGACAGCCCATCGAGCTTTCCAGTTTTGTAAGCAGTATAAACGAACTACAGAGTTTCGAAGACTTTGCGAAATCATTAGAAACCATTTGGCTAATCTTAACAAATATCGGGACCAACGAGACCGACCTGATCTTTCTGCTCCTGAAAGCTTGCAACTGTACCTTGATACAAGATTTGAGCAGCTGAAAATTGCCACTGAGCTTGAACTGTGGCAGGAAGCCTTTAGATCTGTTGAAGATATACATGGGTTGATGTGCATGGTCAAGAAAACTCCGAAACCATCCTTGATGACGGTTTACTATGTTAAGTTGACTGAAATATTTTGGATATCTTCAAGTCATTTATATCATGCATATGCATGGTTCAAGCTCTTTTTGTTACAAAAAAGTTTCAACAAAAATCTGAGTCAGAAGGATCTCCAGTTAATAGCTTCATCTGTTGTTTTAGCTGCACTTTCAGTGCCTCCTCATGATCGCACTTACAGTGCATCTCATTTAGAGCTAGAGCATGAAAAGGAGCGGAATTTGAGGATGGCTAATCTTATAGGCTTTAATCTTGAAACTAAGCCTGAGAGCAGAGAAATGCTCTCAAGGTCATCACTTCTCGCTGAACTGGCATCAAAGGGTGTGATGTCTTGTGTTTCACAAGAAGTGAAAGACATTTACTATCTTTTGGAACATGAATTTCTACCCTCGGATCTTGCACTAAAAGTACTACCCTTGCTAAATAAAATTTCAAAATTAGGGGGTAAGTTTACCTTTGCTTCATCAGTTCCAGAGGTGCAATTTTCGCAGTATGTCCCAGCACTTGAAAAGTTAGCTACCTTGAGGTTACTACAACAGGTGTCTAATGTGTACCAAACAATGAAGATTGATAACCTTGCTGGGTTGATCCCTTTCTTTGATTTTTCCGTTGTGGAAAAGATTTCTGTCGATGCTGTTAAGCAGAAATTTCTATCAATGAAAGTCGACCACATGAAAAATGTTGTTATTTTCTGTAAGACGAGTCTTGAGGCTGATGGCTTGAAGGATCACTTGGCTAGTTTTGCTGAACAATTGAATAAGGCAAGGCAATTGATTTGTCCTCCTGATAGGAAACAATCAAAACTTGGAGCCTTGCTCCCGACCTTGTCTGAGGTTGTGGCCAAAGAACACAAGAGGCTCCTTGCTCGGAAATCAATTATTGAAAAGAGGAAAGAGGAACAAGAACGACAGCTTCTTGAAATGGAACGCGAGGAGGAGTCGAAGAAGTTAAGACTGCAGAAAGTTAATGACGAAGCCGAGAAAATACGACTTGAAAAAGAGTCTGAGTTGAGGCGAAAGCAAAGGATCCAAAGGGAAATGGAGGAAAAAGAAAAGGAAGAAGCACGGCTTTTACTTGAGGAACATGAAAAGCGTTTTAAGTTAAAGGGTAAAAAGGCCCCCCCCATAGATAAGGCCAACCTTTCTAGGCAGACCTTGTTACAGATAAGTTTGATTGAACAACAAAAACAGAGACAAGATATTGAGAAGAAACTGCAGAAATTAGCTAAAACCATGGATCATTTGGAAAGAGCAAAGAGAGAAGAGGCTGCTCCACTTATTGAAGCTGCATATCAACAGCGCCTAGTGGAAGAGAGGATTCTTCATGAGCGTGAACAGCAAATGGAGGTTGAACTGAGCAAACAACGTCATGCTGGAGATCTCCATGAGAAGGAGAGGCTTAGTCGAATGATGGGCAATAAAGAGATATATCAAGAGAAAGTTGTCAGTCATCGCCAAGCAGAAACTGATAGACTTAAGAAAGAAAGGGAGGATCGCATCTCTAGGATTTTACAATCCAGAAAACAGGAGAGGGAAAAGATGAGGAAGTTGAAGTATTTTCTTCAGGTTGAAGAAGAGAGACGACAAAAATTGCGTGAGGCAGAAGAAGCTCAGAAGCGTCAAGAGGCAGAGAGAAAAAAGAAGGAACAGCTTGAACACCAAGCAAAATTGGATGCGATAGCTGAAAAGCAGAAGCAAAGGGAAAGAGAAATTGAAGAAAAGGCTGAGAGGGAAAAGAGGGAAGCATTGTTGGGCAGACCTACTGAACCTGCTCTGAGACCTTATGAGCCTCCTGCCCGTCCATTGGAGTCTGGTGCTGCTCCTGCTGCAGCTGCTGCATCCTCAGCTCCAGGGAAATATGTTCCCAAGTTCCGGCGAGGAGGTGCTGATACCACAAGAGCTCCTCCTCCAGAAGCAGATCGTTGGGGCAACAGTAGCAGCAAGCCAGATGGTGACAGGTGGGACCGCAACTCTTCATTTGGTTCTGGCGGGGGTAGGTCATCTACAACTTGGTCATCTTCCAGGGTTTCGCGTGATCGTCATTGA 2877 0.4265 MTSFLKPENALKRAEELINVGQKQDALQTLHDLITSKRYRAWQKTLERIMFKYVELCVDMRKGRFAKDGLIQYRIICQQVNVSSLEEVIKHFMHLSTEKAEQARNQAQELEEALDVDDLEADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAHRAFQFCKQYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKIATELELWQEAFRSVEDIHGLMCMVKKTPKPSLMTVYYVKLTEIFWISSSHLYHAYAWFKLFLLQKSFNKNLSQKDLQLIASSVVLAALSVPPHDRTYSASHLELEHEKERNLRMANLIGFNLETKPESREMLSRSSLLAELASKGVMSCVSQEVKDIYYLLEHEFLPSDLALKVLPLLNKISKLGGKFTFASSVPEVQFSQYVPALEKLATLRLLQQVSNVYQTMKIDNLAGLIPFFDFSVVEKISVDAVKQKFLSMKVDHMKNVVIFCKTSLEADGLKDHLASFAEQLNKARQLICPPDRKQSKLGALLPTLSEVVAKEHKRLLARKSIIEKRKEEQERQLLEMEREEESKKLRLQKVNDEAEKIRLEKESELRRKQRIQREMEEKEKEEARLLLEEHEKRFKLKGKKAPPIDKANLSRQTLLQISLIEQQKQRQDIEKKLQKLAKTMDHLERAKREEAAPLIEAAYQQRLVEERILHEREQQMEVELSKQRHAGDLHEKERLSRMMGNKEIYQEKVVSHRQAETDRLKKEREDRISRILQSRKQEREKMRKLKYFLQVEEERRQKLREAEEAQKRQEAERKKKEQLEHQAKLDAIAEKQKQREREIEEKAEREKREALLGRPTEPALRPYEPPARPLESGAAPAAAAASSAPGKYVPKFRRGGADTTRAPPPEADRWGNSSSKPDGDRWDRNSSFGSGGGRSSTTWSSSRVSRDRH* 959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3432 958 MobiDBLite consensus disorder prediction 804 958 - -
Tpr6g3432 958 Hamap Eukaryotic translation initiation factor 3 subunit A [EIF3A]. 1 933 IPR027512 GO:0005852
Tpr6g3432 958 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT 1 905 IPR027512 GO:0005852
Tpr6g3432 958 Coils Coil 668 698 - -
Tpr6g3432 958 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 441 532 - -
Tpr6g3432 958 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT A 1 905 - -
Tpr6g3432 958 Coils Coil 561 642 - -
Tpr6g3432 958 Coils Coil 834 858 - -
Tpr6g3432 958 Gene3D - 351 509 - -
Tpr6g3432 958 Gene3D - 269 346 - -
Tpr6g3432 958 ProSiteProfiles PCI domain profile. 316 513 IPR000717 -
Tpr6g3432 958 SMART PINT_4 441 532 IPR000717 -
Tpr6g3432 958 Pfam PCI domain 373 508 IPR000717 -
Tpr6g3432 958 Coils Coil 797 831 - -
Tpr6g3432 958 Gene3D UVR domain 217 268 - -
Tpr6g3432 958 MobiDBLite consensus disorder prediction 804 863 - -
Tpr6g3432 958 Coils Coil 93 120 - -
Tpr6g3432 958 MobiDBLite consensus disorder prediction 937 951 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3432 Tpr-Chr6 37094821 37102314 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3432 1 957 Eukaryotic Initiation Factors Gene Family AT4G11420 69.641 0.0 1259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3432 K03254 - gmx:100803796 1404.81