Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3426 ATGGTGAACATAACTTCCATCAAAACTTCCTCTAATGGTGTCTGGCAAGGTGATAATCCCCTCGATTTCGCTTTCCCTCTCCTCATTGTTCAAACCGTCTTAGTCCTCGTCGTTAGCCGCTCCCTCGCCTTCCTCTTTAAACCTCTCCGTCAACCTAAAGTCATCGCCGAGATCGTCGGTGGAATTCTGTTAGGTCCATCGGCGTTGGGAAGGAGTAAAGGCTATTTGCACCGCATTTTCCCGTCATGGAGTTTACCAACGCTCGAATCCGTCGCAAGCATAGGTCTATTATTCTTCCTCTTTCTCGTTGGTCTCGAGTTAGATCTAAACTCAATTCGTCGTAGCGGTAAAAGAGCATTCAGTATAGCAGCATGCGGAATCTCTCTTCCGTTTGTCTGCGGTATCGGCGTCGCCATTGTCCTCCGTAAAACCGTCGACGGAGCAGATAAAGCTGGATTCGGTCAATTCATCGTTTTCATGGGAGTAGCACTATCAATAACTGCATTTCCTGTCTTAGCACGAATCCTCGCTGAACTCAAACTTCTCACAACGCGCGTCGGTGAAACCGCCATGGCAGCCGCTGCATTCAACGATTTAGCCGCGTGGATTTTACTCGCTTTAGCAATCGCGTTAGCTGGTAGTGGAGCTGACGGCGGAGACAAAAAAAGCCCTCTCGTCTCGGTTTGGGTACTTCTCTCCGGTGTCGGTTTCGTTGCTTTTATGATGATTGTTATAAGTCCTGTAATGAAGCGCGTGGCGCAAAGATGCTCTGTTGAGAATGAAGCAGTTGACGAAGTTTATATCTGTTTAACACTCGCGGGTGTAATGGTTTCAGGATTCATAACTGATTTTATAGGGATTCACGCGATTTTCGGCGCGTTTGTTTTTGGATTAACGATTCCAAAAACGGGGAATTTTGCGGAGAGGTTGATAGAGAGAATAGAGGATTTTGTTTTGGGTTTGTTGCTTCCACTTTATTTTGCATCGAGTGGGTTGAAAACTGATGTGACTAAGATTAGTGGAGGAAAAGCTTGGGGGTTGTTGGTTCTGGTGATTTCTACAGCTTGTGCTGGGAAGATTCTGGGAACTTTTGTTGTAGCTATGTTGTGCAGGATGCCAGTTAGAGAGGCGATTACACTTGGAGTGCTGATGAACACCAAAGGACTTGTTGAACTCATTGTTCTCAATATTGGAAAAGAGAAAAAGGTTTTGAATGATGAAGTATTTGCGATCTTGGTACTTATGGCTCTATTCACCACCTTCATCACAACTCCACTAGTGATGGCAATCTACAAACCAGCTCGTGGCATCGCAACCAAGACAATTCGCAAGCTAGGTGACATGTCCTCCTCCCACTCTAAGGACAAGAAGGTGGTGGATACTCTTCGAGTCCTAGCTTGCATACACGGTCCAACCAACATTCCCGCTATCATCAACCTCATTGAATCAACACGTAGCACCAAAAGTTCAATCCTCAAACTCTTCATAATGCACCTTGTTGAGCTCACAGAACGTTCATCCTCCATCATCATGGTTCAACGTGCTCGCAAAAACGGTTTTCCATTCTTCAATCGGTTCAACCGTGATGAATGGTATAACCGTCTTGCGGGTGCTTTTCAGGCATACAGTCAATTGGGCCGAGTCATAGTCCGGTCCACTACAGCAATCTCTTCTCTTTCCACAATGCACGAGGATATATGCCACGTGGCGGAGGAAAAGAGAGTGACAATGATTATATTACCCTTCCATAAACATTGGAAGATGGAAGTAGATGATGAAAATGACAATGAGTCCCATGAGGTGTTGGAGAATGCTGGACATGGGTGGAGAGGTGTGAACCAAAGGGTACTAAAAAATGCACCTTGCTCTGTGGGTGTGCTTGTCGATAGAGGATATGGGCTTGGACCGAAGAATTTGGGCTCAGATGGTACGTTGGCCCAAAGAATATGCATTGTGTTTTTTGGCGGGCCTGATGATCGTGAGGTTCTAGAGTTGGGGAAGAAAATGGTCCAACACCCTGCAGTGGCATTGACTGTTGTAAGGTTTGTTGAGGAAAATGGATTGAGTGGTAATAACTTTGTTTTACGCCAATCACCTGGCAAAAGTGCTGATGAAAACTATAGCTTCTCTATTGCCAAAATGAACCGACAAAAAGAACAGGAGTTGGATGAAAACGCAATGGAGATGTTTCGAAGCAAGTGTGGTGAAACAGTGAAGTACATTGAAAAGGGTAGCGGAAATGTTGTGGAGGAGGTGATAGCGTTAGGCGAAAGTGCGAATTATGATCTCATAGTAGTTGGGAAGGGTCGGTTTCCGTCCACTATGGTGGCGGAATTAGCAGAGAGGGAAGCAGAGCATGCAGAGTTAGGTCCTATTGGAGACATTCTAACATCCTCAATGGGTCACAAGATGGTGTCATCAGTACTTGTTATTCAGCAACATGATGTGGCATTGACGGAGGATGCACCAATGTACAAGGTTAAGGTGCATGATGAGAATGTTGCAGAGGTTTCATCTGCTAGACATGAGATCACTTTTGCAAATGCAGTGTAA 2553 0.454 MVNITSIKTSSNGVWQGDNPLDFAFPLLIVQTVLVLVVSRSLAFLFKPLRQPKVIAEIVGGILLGPSALGRSKGYLHRIFPSWSLPTLESVASIGLLFFLFLVGLELDLNSIRRSGKRAFSIAACGISLPFVCGIGVAIVLRKTVDGADKAGFGQFIVFMGVALSITAFPVLARILAELKLLTTRVGETAMAAAAFNDLAAWILLALAIALAGSGADGGDKKSPLVSVWVLLSGVGFVAFMMIVISPVMKRVAQRCSVENEAVDEVYICLTLAGVMVSGFITDFIGIHAIFGAFVFGLTIPKTGNFAERLIERIEDFVLGLLLPLYFASSGLKTDVTKISGGKAWGLLVLVISTACAGKILGTFVVAMLCRMPVREAITLGVLMNTKGLVELIVLNIGKEKKVLNDEVFAILVLMALFTTFITTPLVMAIYKPARGIATKTIRKLGDMSSSHSKDKKVVDTLRVLACIHGPTNIPAIINLIESTRSTKSSILKLFIMHLVELTERSSSIIMVQRARKNGFPFFNRFNRDEWYNRLAGAFQAYSQLGRVIVRSTTAISSLSTMHEDICHVAEEKRVTMIILPFHKHWKMEVDDENDNESHEVLENAGHGWRGVNQRVLKNAPCSVGVLVDRGYGLGPKNLGSDGTLAQRICIVFFGGPDDREVLELGKKMVQHPAVALTVVRFVEENGLSGNNFVLRQSPGKSADENYSFSIAKMNRQKEQELDENAMEMFRSKCGETVKYIEKGSGNVVEEVIALGESANYDLIVVGKGRFPSTMVAELAEREAEHAELGPIGDILTSSMGHKMVSSVLVIQQHDVALTEDAPMYKVKVHDENVAEVSSARHEITFANAV* 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3426 850 Pfam Sodium/hydrogen exchanger family 34 426 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Tpr6g3426 850 PANTHER BNAC06G14930D PROTEIN 2 828 - -
Tpr6g3426 850 Gene3D - 506 791 - -
Tpr6g3426 850 PANTHER CATION/H + ANTIPORTER 2 828 - -
Tpr6g3426 850 Gene3D - 27 436 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3426 Tpr-Chr6 37000008 37007050 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3426 75 827 Antiporter Super Family AT3G53720 65.576 0.0 918
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3426 - - cam:101503484 1207.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3426 6 37000008 37007050 Tpr6g3426 6 37000008 37007050 ECH