Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3412 ATGGCATCACCTCAAAATTTTGCATCCAAGTTAACAGCACTTGTTGTAGATGACCATAAAATCTACCAAAAGGTTCATCAAAAGATGTTGAATAATTTTGGAGTGAAAAGTCATGTTGTGGAAAATGGAAAAGAAGCCGTGGACATTCATTGGCATGGCAAAAAATTTGACCTAATTCTCATGGACATGGATATGCCTATCATGAATGGCATTGAGGCAACAAAGGAACTTCGTGCAATGGGAGTTTGTAGCACTATAGTTGGTGTGACGTCACGCTCTACCGAAGAAGAAATATTAAAGTTTATGGAAGCTGGACTTGATGACTATCAAGAGAAACCCTTGACCATACCAAAGCTTACTTCCATTCTTCATAAGATCATCAACTCTAATCCAATTTAA 399 0.3759 MASPQNFASKLTALVVDDHKIYQKVHQKMLNNFGVKSHVVENGKEAVDIHWHGKKFDLILMDMDMPIMNGIEATKELRAMGVCSTIVGVTSRSTEEEILKFMEAGLDDYQEKPLTIPKLTSILHKIINSNPI* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3412 132 SMART REC_2 11 123 IPR001789 GO:0000160
Tpr6g3412 132 Pfam Response regulator receiver domain 14 123 IPR001789 GO:0000160
Tpr6g3412 132 ProSiteProfiles Response regulatory domain profile. 12 127 IPR001789 GO:0000160
Tpr6g3412 132 PANTHER TWO-COMPONENT RESPONSE REGULATOR 24 4 129 - -
Tpr6g3412 132 Gene3D - 1 130 - -
Tpr6g3412 132 CDD REC_hyHK_CKI1_RcsC-like 14 123 - -
Tpr6g3412 132 PANTHER TWO-COMPONENT RESPONSE REGULATOR 4 129 - -
Tpr6g3412 132 SUPERFAMILY CheY-like 10 128 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3412 Tpr-Chr6 36847115 36847954 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3412 11 129 Response Regulator Gene Family AT3G04280 42.975 6.79e-26 93.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Tpr6g3412 Response_reg 5.9e-23 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3412 - - gmx:100794931 167.162
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3412 6 36847115 36847954 Tpr6g3412 6 36847115 36847954 ECH