Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tpr6g3409 | ATGAATGGTGTGAAGAATAATAGAAGGGTTCACAATGATGACAAACCTTTTCCTGGTTGTTTGGGAAGAATGGTTAATCTCTTTGATTTAACTCCTACTGCTGTAAATGGAAACAAGCTTCTCACCGATAAGCCGCACCGCGAACATGCAGCATCGCTTTCAAGAAGTCAATCAGATGTTTCGAGGACTGCGAGTCCTTCATTTGGTGACCGAATAGAAGATAAGCCGATTGTTTCTGACTTAATGAGATCATCTTCAAATAAAAAAATAAATGGAACACCCATCAAGATGCTCATGGACCAAGAAATGTCAAAAGAAGTTGTTTCCAAGCACACTCCACCTAATGTGGTTGCAAAATTAATGGGCCTTGAAGCCCTTCCACGGGGAGAACATGGTTTAGCTGTGGAGAGAAGCCCTGGAGGAGATTGTTCTCAGCATATGTGTGGTCATTCTGGGACATCATTCAATCATTGGCAGCTGGAAGATAGGTTTATGGACAAAGAAATGCTTCATGAACCTCATCCGAGCAGAGAACAGGTTGCTTACAAAGATATTTATGAAATATGGCTGCAATCACAGAGAACAAGCAATGTAAAAGACAAGACACCAGAGAGAGGGAAGTGGGCTGAAGATGTTAATGAGAAGAAAATGGCTCTTATTCGCCAAAAATTCATGGAAGCAAAGCGTCTTTCTACAGATGAGAAATTACGTCAATCGAAGGAGTTTGATGAAGCCTTGGAAGTTTTAAGCTCCAACAACGATCTGTTAATCAAGTTATTGGATTCTCAAAATCTTTATGAACGGCAGTCTACTCCACTGGCTGAGACAAAGCGTATTACTGTTCTTAAACCTTCAAAGATGGTTGACAATGAAAAATTCAGTAGAAAGGGAAACAATGACAAACACATTAAGAAACCATTAAATAATGATGTTGCATGGGAGAAAAATAGTTCTGGATTCTCTCCAGCCAGTCAGAAAGTTGATGAATTCCCTGTTCAACCTACTCGAATAGTGGTACTGAAGCCTAGTTCTGTGAGGGCACATGATATTAATACACTGGTTTCTCCAGCAGCGTCATCACCTCAAAATATGCGAAGTGGAAACTTCTATCACGGCCATGAAGATGATGATGATCTACTGGAATCAAGAAAAGTGGCGGAAGAAATTACACAGCAGATGTATGAACATGAAGACCTGAGGAGCTGTCAAAGAGATGAAACTGTGTATTCTTCAGTATTTTCCACGGGCTATATTGGTGATGACAGTTCATTCTACAAGTCAGATCATGAGTGTACTGCAGGGAATTCTAGTGATTTGGAAGCTATGTCGCCATCTCCCAGACATTCTTGGGATTATGTTAATCGCTGCGGAAGTCCTTATTCTTCATCATCCTTCAGTCGTGCATCCTGTTCTCCCGAGTCATCTGTTTGCAGAGAGGCCAAGAAACGGCTTTCTGAAAGATGGGCCATAATGGCATCTAAGAAAAGTCTTCAAGAGCAAAGACATATGCGGAGAAGCTCTACCTTGGGCGAGATGCTTGCTCTGTCAGATATAAAGAAATCTCTAATATCGGAGTTTGAAGGTATTAGTAAAGAAGAAGAACAGAGTGAATCTGCTTCTTGCAGTAAAAATTTAAATGAAGAAACATGCGCAGATGGTTCTCCGAAAAACCTTCCCAGGTCAAAATCTGTCCCTATATCTCCCACTGTCTATGAAAATGGGCGCTACGTGGAAGCTTGTAATAATGATGCTGGTAAAGTAAACGACTCCAAGGAGCTAACAAAGTCAAAGAGTATGAAATCATCATTTAAAGGGAAAGTTGCAAGTTTCTTATTCTCAAGGAATAAGAAATCAATCAGGGAAAAATCTTGTTTATCTCATTCTACAGATGACTCCCAATCAACTGTCGCAGAAACATCTGTATCTCCAATAAACTCACCTGAAGTCCTTAGGAATGATGTATCTCAAAGCTTCAAAGGCGACTCCTTTGGAGAGTGTTCTAATCCAAATCTATGGGAATCATCAAGCAAAATTTTATCCGATTCTGTCTCAAACAGACAAGGCCCAATATCTATGGAGCCTGAATTGGCAGTGTCAAAGCCCACAATGACAGGAATATCAAGTGAAAACCAGGATCAGCCAAGTCCAATCTCAGTTTTAGAACCTCCATTTGAAGATGAAAATGCAGCTCATGAGTCCTTGGACTGTATGAAGGGTGGCCAGCTGGGATCACGGGTGTCTTTGAAGTCTAATTTAATTGATAAATCACCACCTATAGGATCAATAGCTCGAACCCTCTCATGGGATGACTCTTGTGCGGAGGTAGCAAATTCGTACACACTAAAGCCTTCGTTGGTTTCCTTAGACACCAAGGCAGAGGATCAAGACTTGCTCGTCTTGGTTCAGAAATTACTATCAGCTGCTGGACTTGATGATCAAGTGCAGTCTGACTCGTTTTACTCTAGATGGCATTCCCTTGAAAGTCCATTGGATCCATCATTGAGGGACAAATACGCCAATCTCAACGACAAGGAGCCTCAACCTCTCCACGAAGCAAAGCGAAGGCATAGGAGATCTAATCAGAAGCTTGTATTCGATTGTGTCAATGTTGCACTAATAGAAATTACTGGTTATGGATCAGAAAGTTCCATAATGGGCAGGTTGTGGAGTGGGGGCCACGGAACACACCAAGTCTCAGAGGGTGCACATACCCTATTGGTGGACCTAATTGTATCCCATATGAAGGAGTTGACATCTAGTGGCATGAGGTCTGTTTGGGGGGATTGTGGGGACAGTAACAGCCTGGTGGTGGAGACTGTTGTCAGAAAAGAGGTCGTGGGTAAAGGGTGGGTTGAGCTTTTGGGATTAGAGATGGATGTTTTGGTGAAGGAAGTAGAAGGGAAGTTGCTAGAAGAACTTGTGGAGGATGCAGTGGTTGATTTGACAGGCAGGGTATGA | 2958 | 0.4206 | MNGVKNNRRVHNDDKPFPGCLGRMVNLFDLTPTAVNGNKLLTDKPHREHAASLSRSQSDVSRTASPSFGDRIEDKPIVSDLMRSSSNKKINGTPIKMLMDQEMSKEVVSKHTPPNVVAKLMGLEALPRGEHGLAVERSPGGDCSQHMCGHSGTSFNHWQLEDRFMDKEMLHEPHPSREQVAYKDIYEIWLQSQRTSNVKDKTPERGKWAEDVNEKKMALIRQKFMEAKRLSTDEKLRQSKEFDEALEVLSSNNDLLIKLLDSQNLYERQSTPLAETKRITVLKPSKMVDNEKFSRKGNNDKHIKKPLNNDVAWEKNSSGFSPASQKVDEFPVQPTRIVVLKPSSVRAHDINTLVSPAASSPQNMRSGNFYHGHEDDDDLLESRKVAEEITQQMYEHEDLRSCQRDETVYSSVFSTGYIGDDSSFYKSDHECTAGNSSDLEAMSPSPRHSWDYVNRCGSPYSSSSFSRASCSPESSVCREAKKRLSERWAIMASKKSLQEQRHMRRSSTLGEMLALSDIKKSLISEFEGISKEEEQSESASCSKNLNEETCADGSPKNLPRSKSVPISPTVYENGRYVEACNNDAGKVNDSKELTKSKSMKSSFKGKVASFLFSRNKKSIREKSCLSHSTDDSQSTVAETSVSPINSPEVLRNDVSQSFKGDSFGECSNPNLWESSSKILSDSVSNRQGPISMEPELAVSKPTMTGISSENQDQPSPISVLEPPFEDENAAHESLDCMKGGQLGSRVSLKSNLIDKSPPIGSIARTLSWDDSCAEVANSYTLKPSLVSLDTKAEDQDLLVLVQKLLSAAGLDDQVQSDSFYSRWHSLESPLDPSLRDKYANLNDKEPQPLHEAKRRHRRSNQKLVFDCVNVALIEITGYGSESSIMGRLWSGGHGTHQVSEGAHTLLVDLIVSHMKELTSSGMRSVWGDCGDSNSLVVETVVRKEVVGKGWVELLGLEMDVLVKEVEGKLLEELVEDAVVDLTGRV* | 986 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tpr6g3409 | 985 | MobiDBLite | consensus disorder prediction | 39 | 73 | - | - | |
| Tpr6g3409 | 985 | MobiDBLite | consensus disorder prediction | 534 | 567 | - | - | |
| Tpr6g3409 | 985 | MobiDBLite | consensus disorder prediction | 834 | 856 | - | - | |
| Tpr6g3409 | 985 | Pfam | DUF761-associated sequence motif | 113 | 127 | IPR032795 | - | |
| Tpr6g3409 | 985 | Pfam | Protein of unknown function (DUF3741) | 221 | 264 | IPR022212 | - | |
| Tpr6g3409 | 985 | PANTHER | M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED | 1 | 984 | - | - | |
| Tpr6g3409 | 985 | PANTHER | M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED | 1 | 984 | - | - | |
| Tpr6g3409 | 985 | MobiDBLite | consensus disorder prediction | 628 | 643 | - | - | |
| Tpr6g3409 | 985 | MobiDBLite | consensus disorder prediction | 623 | 643 | - | - | |
| Tpr6g3409 | 985 | MobiDBLite | consensus disorder prediction | 837 | 852 | - | - | |
| Tpr6g3409 | 985 | Pfam | Domain of unknown function (DUF4378) | 801 | 976 | IPR025486 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Tpr6g3409 | Tpr-Chr6 | 36796615 | 36802360 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Tpr6g3409 | 1 | 982 | TRM (TON1 Recruiting Motif) Superfamily | AT4G28760 | 43.812 | 0.0 | 625 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tpr6g3409 | - | - | gmx:100816611 | 1430.23 |
Event-related genes