Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3407 ATGGAGAATTTATTTCGCCTAGCGGATCACGAAGACTTTTTTTCACGCCGTTGCATTTGGGTCAATGGACCTGTGATCATAGGCGCAGGTCCATCTGGCCTAGCAACAGCTGCATGTCTTCGAGAACAAGGAGTACCCTTCGTTGTTCTCGAAAGAGCTGATTGTATAGCATCACTATGGCAAAGAAGAACATATGATAGATTAAAACTTCATCTCCCAAAACAATTCTGTCAACTACCTAACCTTCCATTCCCTGATGATTTCCCTGAATACCCTTCAAAGAAACAGTTCATAAACTACCTTGAAACTTATGCTAACAAATTCGAAATCAACCCGCAATTCAACGAGTGTGTTCAATCTGCTAAATATGATGAAACAAGTGGATTGTGGAGAGTTAAAACCAATGAAGTTGAGTATATTTGTAGGTGGTTAGTTGTTGCTACCGGCGAAAATGCTGAGCGTGTTACTCCCGAAATTGAAGGACTTTCTGAATTCAAAGGTGAAGTTGTTCATGCTTGTGATTACAAGTCAGGGGAAAATTTCACAGGAAAGAAAGTTCTTGTTGTTGGATGTGGAAATTCTGGAATGGAACTCTCACTTGATCTTAGCAATCATCATGCTTTACCTTCAATGGTTTGTCGCAGCTCGGTTCATGTCTTACCAAGAGAAATATTTGGAATATCAACTTTTGAATTAGCAGTTATGATGCTAAAATGGTTACCACTTTGGATTGTTGACAAGCTTCTTTTGATCTTGACATGGTTTATTTTGGGTGATATGGAAAAATATGGTATCAAAAGACCTTCAATGGGTCCTTTACAGTTGAAGAACACAGAAGGAAAAACACCAGTTTTGAATATTGGTACTCTGGAGAAAATTAGATCCGGCGATATAAACGTTGTTCCTGGAATCAAAAGGTTTAATAATAATGAAGTTGAACTTGTTAATGGTGAAAAGCTTGATATTGATGCAGTTGTTCTTGCTACTGGTTACCGCAGCAATGTCCCTTCTTGGCTTCAGGAAGGTGAATTTTTCTCAAAGAATGGATACCCAAAAATGCCATTTCCACATGGATGGAAAGGAAATTCAGGGCTTTATGCAGTAGGGTTTACAAAGAGAGGGCTTTCTGGTGTTTCATCTGATGCTGTTAAAATTGCACAAGATATTGGAAAAGTTTGGAAACATGAGACAAAACAAAAGAAGCAACGCAACACTGCTTGTCATAGACGTTGCATTTCACAATTCTAA 1248 0.3854 MENLFRLADHEDFFSRRCIWVNGPVIIGAGPSGLATAACLREQGVPFVVLERADCIASLWQRRTYDRLKLHLPKQFCQLPNLPFPDDFPEYPSKKQFINYLETYANKFEINPQFNECVQSAKYDETSGLWRVKTNEVEYICRWLVVATGENAERVTPEIEGLSEFKGEVVHACDYKSGENFTGKKVLVVGCGNSGMELSLDLSNHHALPSMVCRSSVHVLPREIFGISTFELAVMMLKWLPLWIVDKLLLILTWFILGDMEKYGIKRPSMGPLQLKNTEGKTPVLNIGTLEKIRSGDINVVPGIKRFNNNEVELVNGEKLDIDAVVLATGYRSNVPSWLQEGEFFSKNGYPKMPFPHGWKGNSGLYAVGFTKRGLSGVSSDAVKIAQDIGKVWKHETKQKKQRNTACHRRCISQF* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3407 415 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 10 413 - -
Tpr6g3407 415 SUPERFAMILY FAD/NAD(P)-binding domain 184 369 IPR036188 -
Tpr6g3407 415 Gene3D - 23 401 IPR036188 -
Tpr6g3407 415 PRINTS FAD-dependent pyridine nucleotide reductase signature 24 43 - -
Tpr6g3407 415 PRINTS FAD-dependent pyridine nucleotide reductase signature 141 159 - -
Tpr6g3407 415 PRINTS FAD-dependent pyridine nucleotide reductase signature 185 203 - -
Tpr6g3407 415 PRINTS Pyridine nucleotide disulphide reductase class-II signature 23 45 - -
Tpr6g3407 415 PRINTS Pyridine nucleotide disulphide reductase class-II signature 142 150 - -
Tpr6g3407 415 PRINTS Pyridine nucleotide disulphide reductase class-II signature 181 205 - -
Tpr6g3407 415 PANTHER INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA3-RELATED 10 413 - -
Tpr6g3407 415 SUPERFAMILY FAD/NAD(P)-binding domain 25 292 IPR036188 -
Tpr6g3407 415 Pfam Flavin-binding monooxygenase-like 26 336 IPR020946 GO:0004499|GO:0050660|GO:0050661
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3407 Tpr-Chr6 36761521 36763791 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3407 K11816 - gmx:100819987 770.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3407 6 36761521 36763791 Tpr6g3407 6 36761521 36763791 ECH
Tpr1g1511 1 13897603 13906376 Tpr6g3407 6 36761521 36763791 PCT