Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3406 ATGTCCCTTTGTATCTGGCTTGTTTCCCCTTTTACCGTGGAAACTTCCAAACAATCAAAATTCTCTTCAATAGGTTCCAGATTTAAGGATCAAGATGACAATGATCTTATGGCCTATTGGCTGTCAAATACGTCAACATTGTTGTTTTTACTTGAACAAAGCTTGAAATCTGGGAGTTCAACAAATGCAACCTCAGTTGGAAAACCACCTAATCCAACATCCCTATTTGGAAGAATGACTATGGGTTTTCGTTCATCCCCTTCTTCTGCCAACTTTGCTGCTCCCTCATCGGTGGTTGTACGCAAGGTAGAGGCTAAGTACCCTACTTTGCTTTTCAAGCAGCAGCTCACAGCCTATTTGGAGAAAATATATGGCATCGTTCGAGATAACTTGACGAAGGAGTTAACATCGGTTCTTGCCTTATGTGTCCAGGCACCAAAAACATATAAGGGAGCGTTACGATCTGGCCGGTCATTCGGTAAAGATTCCCCAATGGTTCACTGGCAGAGTATTATTGAAAGAGAACTTTGTGCCTCCGGTTCTTATCCGAAAGATCTTCAGTCAAACATTCTCATTTATTAA 582 0.4158 MSLCIWLVSPFTVETSKQSKFSSIGSRFKDQDDNDLMAYWLSNTSTLLFLLEQSLKSGSSTNATSVGKPPNPTSLFGRMTMGFRSSPSSANFAAPSSVVVRKVEAKYPTLLFKQQLTAYLEKIYGIVRDNLTKELTSVLALCVQAPKTYKGALRSGRSFGKDSPMVHWQSIIERELCASGSYPKDLQSNILIY* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3406 193 PANTHER MYOSIN 24 173 - -
Tpr6g3406 193 ProSiteProfiles Dilute domain profile. 18 193 IPR002710 -
Tpr6g3406 193 PANTHER MYOSIN-6 24 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3406 Tpr-Chr6 36717616 36729552 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3406 24 173 Myosins gene family AT5G43900 63.226 4.87e-58 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3406 K10357 - gmx:100791070 232.261