Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3398 ATGGGAGCACCTCAAGATCATTCAGTGACCCCAAGAAAAAGAGTACTCGTTGTGGATGATGATGATCGTGTCCGAAAGATTCACCAAGATCAATTAAAATCACTTGGTGTTGATTCTTGTTTTGCAAAAAATGGGAAAGAAGCCTTGGACATAATTTCTTCGGATTGGTCTGCTCAAACCTTTGATCTAATTCTCATGGCTAGGCATATGCCACTCATGGATGGAATTCTGACGACTATGGTATTGTGCACAATAGGGTACCCTAGTTTGATTTATGGTGTGTCGGATCGCCTTACAGAAGCAGAATGGGAAGAATTTTTTAGTGCAAGGCCAGATGATATCTATGATGAAGGGAAACCTTTGTCCATTGATACAATGAAATATATTGTTGAATCAGTTCCTACTCCCGAACCTTGTGATACTTGGAGGGAAAGAGTGTCTAGATTACCTAAACAAGGCAAAGGGTATTGGTACAGTTGTTTTTTTGACCAATAA 495 0.398 MGAPQDHSVTPRKRVLVVDDDDRVRKIHQDQLKSLGVDSCFAKNGKEALDIISSDWSAQTFDLILMARHMPLMDGILTTMVLCTIGYPSLIYGVSDRLTEAEWEEFFSARPDDIYDEGKPLSIDTMKYIVESVPTPEPCDTWRERVSRLPKQGKGYWYSCFFDQ* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3398 164 SUPERFAMILY CheY-like 12 132 IPR011006 -
Tpr6g3398 164 Pfam Response regulator receiver domain 15 107 IPR001789 GO:0000160
Tpr6g3398 164 ProSiteProfiles Response regulatory domain profile. 14 134 IPR001789 GO:0000160
Tpr6g3398 164 SMART REC_2 13 130 IPR001789 GO:0000160
Tpr6g3398 164 PANTHER TWO-COMPONENT RESPONSE REGULATOR 12 132 - -
Tpr6g3398 164 PANTHER TWO-COMPONENT RESPONSE REGULATOR 24 12 132 - -
Tpr6g3398 164 Gene3D - 3 132 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3398 2 107 Response Regulator Gene Family AT3G04280 38.532 2.97e-14 64.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Tpr6g3398 Response_reg 1.7e-10 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3398 - - cam:101493171 127.487