Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3397 ATGCTGCCGTCGGTCATGTTCCTCTTTGCTCTTCTTAACTTACTATTCTCTTCCCAAGTGGAGTCATTTTCCCTGAGTTTGCGGTTTGCTTCATTTGAACAAACTAAATTGTGGTTAGCCAAGCCTTCTTCTGCACCAATTTCTGCACCCGTGCCATCTCCATCTTATCAAGGTCCTAGTGTGGCTCCAAGACACAAACATCATCATCGTCACCGACGCCATCATAGCATGAGACCATACATAGGGGCTCCACCCCCTTCCACAGACCAAGCTTGCGATCAAACATGTACGGATCCTCTCACATCAACTCCCTTTGGTTCACCTTGTGGTTGTGTATTTCCTATGAAAGTCAGACTTACACTGGATGTAGCTCCTTATGCTGTTTTTCCAGTAATGACAGAGTTAGAGTATGAAGTTGCGCTAGGCACATATTTAGAACAGAGTCAGGTGGTGATAATGGGTGCAACTGCTGACAATCAAAACCAGGGAAGAACTATTGTTGATATTAACTTGGTTCCGTTGGGAGAAAAGTTTGACAACACAACTGCAGCCCTGACATACGAGAGGTTTTGGCACAAAAAAGTTCCTCTAAATAAGAGCATTTTTGGTGATTACGCTGTCGTGTACATTACATATCCAGGAATTCCATCTTCGCCACCATATGAAACTTCAACTGGGAGCGGTCCCAGTCAAAATGCTGATGGTAGTCTTCCATTCAGCGCCGATTTTGCTAGCAAGAACCAGAAGATGAATCTTAGAACCATAATCATCATTGCGTTGTCTTCTTTTGTGCTCTTGCTGGTTTTGGTTGCAGCATGTTCTGTAACTTTGAAATGGAGGAAGACTAGGGGACCATCAAGTGCTGTTGGCCCAGCCTTTACATCTTCTCTAAACAAGAGATCTGGCTTGGGGTCTATGTTGTCAAGCAGTATTACAAGCTCGACATCAGTGTCCCTCATGTCCACAATGCCCACTTCCATTCTCTCTGTTAAAACGTTTTCACTTTCTGAGATTGAGAAAGCAACAGATAAGTTTAATTCAAAGAGAGTATTAGGGGAAGGGGGATTTGGACGCGTGTATAGTGGGACATTGGAAGATGGGGCTGAAGTTGCAGTGAAGCTCCTTACAAGAGATAATAATCAGAATGGAGACCGTGAATTTATTGCAGAAGTTGAGATGTTAAGCCGTTTGCATCATCGTAATCTAGTGAAACTTATTGGAATATGCATTGAAGGGCGCAAGCGTTGCCTGGTATATGAGCTAGTTCCTAATGGCAGCGTGGAGTCACATCTGCATGGTGATGACAAGAATAGGGGACCTCTAGATTGGGAAGCACGAATGAAAATTGCCCTGGGAGCTGCGAGAGGATTGGCCTATCTTCACGAGGATTCTAATCCCCGTGTAATTCATCGGGACTTCAAAGCCAGCAATGTGCTATTAGAAGACGACTTTACCCCTAAAGTTTCTGATTTTGGTTTGGCAAGAGAAGCAACTGAAGGAAGTAATCATATTTCTACACGGGTGATGGGGACTTTCGGGTATGTTGCTCCAGAATATGCAATGACGGGCCATTTACTGGTTAAAAGTGATGTTTATAGTTATGGCGTTGTGCTTCTTGAACTTCTCACAGGCAGAAAACCAGTGGATATGTCTCAACCTCAGGGACAGGAGAATCTGGTAACTTGGGCACGAACACTGTTGACTAGCAGAGAAGGTTTAGAACAGCTAGTGGATCCATCGTTGGCGGGAAGTTACAACTTCGATGACATGGCAAAGGTAGCAGCTATTGCGTCAATGTGTGTTCACTCTGAGGTCACACAGAGACCTTTTATGGGTGAAGTAGTGCAGGCTCTTAAATTAATATACAATGACACAGACGAGACTGGTGGAGATTATTGTAGTCAGAAGGACTCCTCTGCTCAGGAGTCTGATTTTAGAGGCGAGCTTGCCCCTTCTGATAGCAGTTGGTGGAACGGTGGAGGGTTAACACCTCGATTGACTTATGGACAAGCATCTTCCTTCATCACGATGGAATACAGTTCTGGTCCACTTGAAGATATAGAAAACAGACCGTTTTCAACTTCAAGCTTTAATGGAGATGAGCTATCTTTACCAATTAGGCATGGGAATAGGTCAGGTCCGTTAAGAACAATCCGAAGCAAGTTATCCTTATATAGATTTTCAGGAAGTCGGAGTGAACACGGGGAACTTTCTTCCAAGCGAAATTGGATATGA 2235 0.4407 MLPSVMFLFALLNLLFSSQVESFSLSLRFASFEQTKLWLAKPSSAPISAPVPSPSYQGPSVAPRHKHHHRHRRHHSMRPYIGAPPPSTDQACDQTCTDPLTSTPFGSPCGCVFPMKVRLTLDVAPYAVFPVMTELEYEVALGTYLEQSQVVIMGATADNQNQGRTIVDINLVPLGEKFDNTTAALTYERFWHKKVPLNKSIFGDYAVVYITYPGIPSSPPYETSTGSGPSQNADGSLPFSADFASKNQKMNLRTIIIIALSSFVLLLVLVAACSVTLKWRKTRGPSSAVGPAFTSSLNKRSGLGSMLSSSITSSTSVSLMSTMPTSILSVKTFSLSEIEKATDKFNSKRVLGEGGFGRVYSGTLEDGAEVAVKLLTRDNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRKRCLVYELVPNGSVESHLHGDDKNRGPLDWEARMKIALGAARGLAYLHEDSNPRVIHRDFKASNVLLEDDFTPKVSDFGLAREATEGSNHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPQGQENLVTWARTLLTSREGLEQLVDPSLAGSYNFDDMAKVAAIASMCVHSEVTQRPFMGEVVQALKLIYNDTDETGGDYCSQKDSSAQESDFRGELAPSDSSWWNGGGLTPRLTYGQASSFITMEYSSGPLEDIENRPFSTSSFNGDELSLPIRHGNRSGPLRTIRSKLSLYRFSGSRSEHGELSSKRNWI* 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3397 744 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672|GO:0006468
Tpr6g3397 744 CDD STKc_IRAK 351 621 - -
Tpr6g3397 744 ProSitePatterns Protein kinases ATP-binding region signature. 351 373 IPR017441 GO:0005524
Tpr6g3397 744 Pfam Protein tyrosine and serine/threonine kinase 347 618 IPR001245 GO:0004672|GO:0006468
Tpr6g3397 744 Gene3D Phosphorylase Kinase; domain 1 317 421 - -
Tpr6g3397 744 SUPERFAMILY Protein kinase-like (PK-like) 322 621 IPR011009 -
Tpr6g3397 744 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ALE2 5 743 - -
Tpr6g3397 744 PANTHER OS01G0750732 PROTEIN 5 743 - -
Tpr6g3397 744 MobiDBLite consensus disorder prediction 50 72 - -
Tpr6g3397 744 ProSiteProfiles Protein kinase domain profile. 345 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3397 744 Gene3D Transferase(Phosphotransferase) domain 1 422 643 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3397 Tpr-Chr6 36667494 36673685 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3397 92 627 Receptor kinase-like Gene Family AT5G56890 60.579 0.0 636
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Tpr6g3397 PK_Tyr_Ser-Thr 1.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3397 - - gmx:100815554 1259.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3397 6 36667494 36673685 Tpr6g3397 6 36667494 36673685 ECH