Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3389 ATGGGAAATCAAGAGAAAGGGAAAGGGCTGATGGAATCTCAAAATTCTGCAGACAAATTAACAGCGCTGGTTGTAGATGACGATAAGCTTGTCCGAATGATTCATCAAGGTCTGTTGAAAAGAGCTGGTGTGAAAAATGAAGCTGTGAAAAATGGTAAAGAAGCTGTAGATATTCATTACAGTGGTCAAAGGTTTGACATTATTCTGATGGATAAGGAAATGCCTATCATGACTGGGATTGAGGCAACCAAGAAACTGCGTTCAATGGGCATACTTAGCAAGATTATTGGTGTGTCGTCGTGTACAGAAGCAAAAAAACAAGAATTTCTGAAAGCAGGGATAGATGATTATCAAGTGAAACCATTGACCATTGGTGTGCTTAATTCGATTCTTGAAGTTGTAAAAGCTAGAAAGTAG 417 0.3861 MGNQEKGKGLMESQNSADKLTALVVDDDKLVRMIHQGLLKRAGVKNEAVKNGKEAVDIHYSGQRFDIILMDKEMPIMTGIEATKKLRSMGILSKIIGVSSCTEAKKQEFLKAGIDDYQVKPLTIGVLNSILEVVKARK* 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3389 138 CDD REC_hyHK_CKI1_RcsC-like 23 131 - -
Tpr6g3389 138 SUPERFAMILY CheY-like 18 135 IPR011006 -
Tpr6g3389 138 SMART REC_2 20 131 IPR001789 GO:0000160
Tpr6g3389 138 Gene3D - 3 138 - -
Tpr6g3389 138 PANTHER TWO-COMPONENT RESPONSE REGULATOR 24 6 136 - -
Tpr6g3389 138 ProSiteProfiles Response regulatory domain profile. 21 135 IPR001789 GO:0000160
Tpr6g3389 138 Pfam Response regulator receiver domain 23 130 IPR001789 GO:0000160
Tpr6g3389 138 PANTHER TWO-COMPONENT RESPONSE REGULATOR 6 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3389 Tpr-Chr6 36556384 36557014 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3389 20 123 Response Regulator Gene Family AT3G04280 44.860 7.12e-25 90.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Tpr6g3389 Response_reg 2.2e-19 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3389 - - cam:101506170 187.963