Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3383 ATGAGGAGTCAGGGTGTCCTCGAAGATAAGTTGGTTCTTTTGAATGGTGTTAGTGGAGCTTTTAGACCAGGTGTTCTCACTGCACTAATGGGTGTCACCGGTGCCGGAAAAACAACTTTGATGGATGTACTTGCTGGTAGAAAAACTGGGGGATATATTACTGGAAACATCACAATTTCTGGGTATCCTAAAAAGCAAGAAACCTTTGCAAGAATTTCTGGATACTGTGAACAAAATGATATACACTCTCCTCATATTACTGTCTATGAATCCTTGCTCTATTCAGCATGGCTCCGATTGCCGGAGGAAATCAATACAGAAACTAGGAAGGTGTTCGTTGAGGAAGTCATGGAGCTAGTGGAGCTGAACCCGCTAAGGGATGCATATGTTGGTCTCCCTGGTATTAACGGTCTCTCAACTGAACAGCGTAAAAGATTGACTATTGCAGTTGAGCTGGTGGGTAATCCTTCTATCATATTCATGGATGAGCCTACTTCTGGGCTAGATGCTAGAGCTGCAGCTATTGTTATGAGAGCAGTTAGGAACATAGCAGACACAGGAAGAACAATTGTGTGTACCATTCACCAGCCTAGCATTGATATCTTTGAATCTTTCGACGAGGTAAACAAGAGCAAAAGTTCATAA 645 0.4264 MRSQGVLEDKLVLLNGVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQETFARISGYCEQNDIHSPHITVYESLLYSAWLRLPEEINTETRKVFVEEVMELVELNPLRDAYVGLPGINGLSTEQRKRLTIAVELVGNPSIIFMDEPTSGLDARAAAIVMRAVRNIADTGRTIVCTIHQPSIDIFESFDEVNKSKSS* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3383 214 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 3 207 - -
Tpr6g3383 214 PANTHER ABC TRANSPORTER G FAMILY MEMBER 6 3 207 - -
Tpr6g3383 214 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 199 IPR027417 -
Tpr6g3383 214 CDD ABCG_PDR_domain2 6 208 IPR034003 -
Tpr6g3383 214 Pfam ABC transporter 14 166 IPR003439 GO:0005524
Tpr6g3383 214 SMART AAA_5 23 214 IPR003593 -
Tpr6g3383 214 Gene3D - 5 209 IPR027417 -
Tpr6g3383 214 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1 211 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3383 Tpr-Chr6 36482063 36486029 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3383 127 198 Calmodulin-binding Proteins AT2G36910 36.111 8.30e-06 44.3