Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3372 ATGAATCACGTTCTTGTTCTTCTTGTCGTTACCATACTTAACCTTGTTCTGTTTTATTTGCTTAAAACGCTTCACTCTATTTTCTATGTCCCATACAAAATCCAACGACACTTCCGTAACCAAGGTATATCCGGCCCTACCTACCGTCCGATCTTTGGAAATTCATCCCAAATCAAACGCCTCTACTCACTAACTAAATCAGAGCCGTACTCATTTGATCACGACATCTTAAAAAGGGTGGTTCCATTTTACCACAGATGGTCTTGCATGTATGGGAAAACTTTCCTTTACTGGTTCGGTTCAACTCCCCGGTTGGCTATATCCGACCCGGAAATGATCAAGGAAGTGTTAGTTACTAAATGTGGAGAGTATGGAAAAGTTCCTTACAATCCACAATCGAAGTTGCTTTTTGGACAAGGACTTGTTGGATTGAATGGTGATCAATGGAATTTTCATAGAAGAATAATCAACTTGGCCTTTAACACTGAGATTCTTAAGGGATGGGTGCCAGATATGGTCGAAAGTGTAACAAAGATGCTGGAAAAATGGGAAATGGAAAGAGGAGAAAGAGATGAATTTGAAATAGACGTGTACAGAGAGCTTCACGATCTTTCTGCAGATGTTATATCAAGGACTGCTTTTGGAAGCAGTTATGAAGAGGGCAAGCATATTTTCAAATTACAGGAGCAGCAAATGCATCTTTTCTCACAGGCGGTTAGAAGTGTATATATTCCTGGATTTAGATATTTGCCGACTAAGAAGAACAGGGATAGGTGGAGACTAGATAAAGAGACGCGCGAATCAATTTGTAAGTTGATTAAGACCAAGACTAATGTCAGAGAAAATACCAAAAATGTACTAAATTCATTAATGGGTTCCTACAAGACTGAAGTTGGCGGAGACGACAAATTAGGGTTGGAAGAAATTATAGATGAGTGTAAAACTATCTACTTTGCTGGAAAGGATACAACAGCTAACTTGTTGACTTGGGCAGTTCTTCTTTTAGCCAAACATCAAGAATGGCAAAGTAAAGCGCGCGAAGAAGTTCTTCGTGTCATTGGACACAATCGAGTCCCAGTTGCGGACAGTTTAAATGAATTTAAGATTGTCAGCATGATAATTAATGAAACACTTCGGCTCTATCCCCCGGCTGCAATGATAACAAGACAAACTGCTAAAAATGTGATGCTAGGGAGCATTGAAGTTCCTGCAAAGACTCAACTCTACTTGGCATTAACCGCTGTTCATCATGACAAAGAAATCTGGGGAGAAGATTGTCATGAGTTTAATCCAATGAGATTTTGCGAGCCTCGGAAGCATTTAGCAGCATTCTTTCCTTTTGGATTGGGGCCTAGAACTTGTGTTGGGCAAAATTTGGCATTGGTTGAGGCAAAAATAGCTCTTGCTTTGATTATTCAACGTTATAGTTTTGTGGTATCTCCAAGCTATATACATGCACCTATACTATTTATAACTTTGCAGCCTCAACATGGTGCACAAATCTTCTTCAAAAGGATTTCATATTGA 1527 0.3942 MNHVLVLLVVTILNLVLFYLLKTLHSIFYVPYKIQRHFRNQGISGPTYRPIFGNSSQIKRLYSLTKSEPYSFDHDILKRVVPFYHRWSCMYGKTFLYWFGSTPRLAISDPEMIKEVLVTKCGEYGKVPYNPQSKLLFGQGLVGLNGDQWNFHRRIINLAFNTEILKGWVPDMVESVTKMLEKWEMERGERDEFEIDVYRELHDLSADVISRTAFGSSYEEGKHIFKLQEQQMHLFSQAVRSVYIPGFRYLPTKKNRDRWRLDKETRESICKLIKTKTNVRENTKNVLNSLMGSYKTEVGGDDKLGLEEIIDECKTIYFAGKDTTANLLTWAVLLLAKHQEWQSKAREEVLRVIGHNRVPVADSLNEFKIVSMIINETLRLYPPAAMITRQTAKNVMLGSIEVPAKTQLYLALTAVHHDKEIWGEDCHEFNPMRFCEPRKHLAAFFPFGLGPRTCVGQNLALVEAKIALALIIQRYSFVVSPSYIHAPILFITLQPQHGAQIFFKRISY* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3372 508 PRINTS P450 superfamily signature 319 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g3372 508 PRINTS P450 superfamily signature 372 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g3372 508 PRINTS P450 superfamily signature 445 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g3372 508 PRINTS P450 superfamily signature 454 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g3372 508 Pfam Cytochrome P450 83 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g3372 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 447 456 IPR017972 GO:0005506|GO:0016705
Tpr6g3372 508 Gene3D Cytochrome P450 27 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g3372 508 PANTHER CYTOCHROME P450, FAMILY 721, SUBFAMILY A, POLYPEPTIDE 1 10 501 - -
Tpr6g3372 508 SUPERFAMILY Cytochrome P450 45 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g3372 508 PANTHER CYTOCHROME P450 FAMILY MEMBER 10 501 - -
Tpr6g3372 508 PRINTS E-class P450 group I signature 88 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g3372 508 PRINTS E-class P450 group I signature 112 133 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g3372 508 PRINTS E-class P450 group I signature 204 222 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g3372 508 PRINTS E-class P450 group I signature 308 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g3372 508 PRINTS E-class P450 group I signature 328 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g3372 508 PRINTS E-class P450 group I signature 444 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g3372 508 PRINTS E-class P450 group I signature 454 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3372 Tpr-Chr6 36343015 36345844 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3372 25 507 Cytochrome P450 AT1G75130 54.321 0.0 561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3372 - - gmx:100775195 804.283