Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3367 ATGAGAGGACAAAATCAAATGAAAGTGGATGAGCTACCACTATATGATTTCAAAAAGCTCGAAACTGCCACAAACAATTTTCACATTGGTAATATGCTCGGGAAGGGAGGTTTTGGCCTAGTATACAAGGGAATAATGGAAGATGGTCTTGAAATTGCGGTGAAAAGACTCTCAAAAGCATCTGGACAAGGAATAGAAGAATTCATGAATGAAGTTTTAGTGATTTCAAAACTTCAACATCGAAATCTTGTAAGACTTCTTGGTTGTTGTGTTGAAAAGGGCGAGCAAATTTTGGTTTATGAGTTCATGCCAAATAAGAGTTTGGATGCCTTTCTCTTTGATCCACTACAAAAGAAAATTTTAGATTGGAGAAAGAGGTCAAACATAATCGAAGGAATAGCTCGAGGTATACTCTATCTTCATAGAGATTCAAGACTAAGGATCATACATAGAGATTTGAAAGCCAGCAACATCTTACTTGATGTCGACATGATTCCAAAAATATCAGACTTTGGTTTAGCTAGAATAGTTAAAGGTGGAGAAGATAACGAAGCTAACACAAACAGGGTTGTTGGAACATATGGTTATATGCCGCCTGAATATGCAATGGAGGGACTTTTCTCTGAGAAATCAGATGTCTATAGCTTTGGGGTTTTATTGCTAGAGATTGTTAGCGGAAGGAGAAATAGTAGCTTTTATAACAACGAGGATTCTCTTAGTCTTGTAGGCTTTGCATGGAAGTTATGGTTAGAGGACAACATTATATCTCTAATAGATCCGGAAGTATGGGATGCATGCGTTGAGAGAAACATGTTGAGGTGCATACACATAGGACTTTTATGTGTGCAAGAACTTCCAAGAGAAAGACCAAATATATCAACTGTAGTTTTAATGCTCATAAGTGAGATTACACATCTTCCTCCTCCAGGAAAAGTTGCATTTGTTCATAGACAAAATTCTAAAAGTACAGAATCTTCACAAAAAAGTCATCAATCTAACTCAATCAACAATGTAACTCTGAGTGAAGTTCAAGGCAGATAA 1041 0.366 MRGQNQMKVDELPLYDFKKLETATNNFHIGNMLGKGGFGLVYKGIMEDGLEIAVKRLSKASGQGIEEFMNEVLVISKLQHRNLVRLLGCCVEKGEQILVYEFMPNKSLDAFLFDPLQKKILDWRKRSNIIEGIARGILYLHRDSRLRIIHRDLKASNILLDVDMIPKISDFGLARIVKGGEDNEANTNRVVGTYGYMPPEYAMEGLFSEKSDVYSFGVLLLEIVSGRRNSSFYNNEDSLSLVGFAWKLWLEDNIISLIDPEVWDACVERNMLRCIHIGLLCVQELPRERPNISTVVLMLISEITHLPPPGKVAFVHRQNSKSTESSQKSHQSNSINNVTLSEVQGR* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3367 346 Pfam Protein tyrosine and serine/threonine kinase 28 295 IPR001245 GO:0004672|GO:0006468
Tpr6g3367 346 MobiDBLite consensus disorder prediction 316 336 - -
Tpr6g3367 346 SMART serkin_6 27 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3367 346 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 4 345 - -
Tpr6g3367 346 SUPERFAMILY Protein kinase-like (PK-like) 11 332 IPR011009 -
Tpr6g3367 346 Gene3D Transferase(Phosphotransferase) domain 1 103 306 - -
Tpr6g3367 346 ProSitePatterns Protein kinases ATP-binding region signature. 33 55 IPR017441 GO:0005524
Tpr6g3367 346 PIRSF TyrPK_CSF1-R 116 230 - -
Tpr6g3367 346 PIRSF TyrPK_CSF1-R 1 115 - -
Tpr6g3367 346 PIRSF TyrPK_CSF1-R 275 344 - -
Tpr6g3367 346 CDD STKc_IRAK 33 299 - -
Tpr6g3367 346 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Tpr6g3367 346 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 4 345 - -
Tpr6g3367 346 Gene3D Phosphorylase Kinase; domain 1 2 102 - -
Tpr6g3367 346 ProSiteProfiles Protein kinase domain profile. 27 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3367 Tpr-Chr6 36304739 36307155 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3367 15 346 Receptor kinase-like Gene Family AT4G11530 56.932 1.63e-129 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr6g3367 PK_Tyr_Ser-Thr 1.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3367 - - gmx:100786846 564.688