Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3363 ATGATTGGATTTATGGGAGCTATGATATCAAATTTAGCATTTGTATTCAGAAATATATTCTCAAAGAAAGGGATGAATGGAATGAGTGTTAGTGGAATGAACTATTATGCTTGTCTTTCAATGATGTCTCTATTAATTCTCACACCTTTTGCTATTGCTGTAGAGGGTCCTCAAGTTTCGGCTGCTGGCTGGCAAACAGCTGTGTCTCAAATTGGTCCTAATTTTGTATGTAAGAGGTTGCTGAAAAAGATTGTTGTTGATGCCCAATCACTAATCGAGACAAAGAGAACTGATTTGGATGCTATTCGGGTCGACATTTCTAAGCTGTTTTTTACTCCACAAGAAGATGATGCTCACATTCTAGTCAAAACCTATATTGATCAGAAGAACTTGAGTCTGGTTCTAGCTAGCATCATAATTTTTTGTGAACTAGTTGCTCGTCGTCTTCGTTTAATCGAATCCCAGTGGGAAATTCCCCCAGACCTGAAGGAAGCTATAGCTACTAGCTAG 510 0.3843 MIGFMGAMISNLAFVFRNIFSKKGMNGMSVSGMNYYACLSMMSLLILTPFAIAVEGPQVSAAGWQTAVSQIGPNFVCKRLLKKIVVDAQSLIETKRTDLDAIRVDISKLFFTPQEDDAHILVKTYIDQKNLSLVLASIIIFCELVARRLRLIESQWEIPPDLKEAIATS* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3363 169 Pfam Triose-phosphate Transporter family 1 82 IPR004853 -
Tpr6g3363 169 Pfam Regulator of Vps4 activity in the MVB pathway 81 168 IPR005061 GO:0015031
Tpr6g3363 169 Gene3D - 74 168 IPR042277 -
Tpr6g3363 169 PANTHER SOLUTE CARRIER FAMILY 35 1 91 - -
Tpr6g3363 169 PANTHER GLUCOSE-6-PHOSPHATE/PHOSPHATE-TRANSLOCATOR-LIKE PROTEIN 1-RELATED 1 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3363 Tpr-Chr6 36278476 36282192 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3363 3 112 Antiporters AT1G61800 67.568 6.06e-42 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3363 K15283 K05350 gmx:100804205 146.747