Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3353 TTTTGTTCTTTTCCTTTTCTAATTGCACAGGTTGTTGCTTTCTTGGGAGTGCTTATTTACAAATTCTATGGAGATGAACTTAGAGAAATGTTTGGTTATGAAGAACATCCATATGGATTTTATACAATGGCTGTTCTCGCCATTATTTTGGTGGGTTTGCTCTATGGCTTCTTTATAGCGATAATATGTGGCCAAAGAATCAATGAACGCCACTACCATGTTCTTGCGAAACAAGAACTGACAAAGGAATATGTGGTAGAAGATCGAGAACATGTAAAGAATGTGCCTGAACTCGACTAG 300 0.3733 FCSFPFLIAQVVAFLGVLIYKFYGDELREMFGYEEHPYGFYTMAVLAIILVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYVVEDREHVKNVPELD* 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3353 99 PANTHER OS02G0132300 PROTEIN 4 99 - -
Tpr6g3353 99 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 4 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3353 Tpr-Chr6 36212447 36213227 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3353 3 71 C3H Transcription Factor Family AT1G50440 54.286 1.76e-17 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3353 - - gmx:100789593 187.193