Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3351 ATGGCCAAGCATCATGTTGTTTTATTCTTCTTTGTGTATTTGGTTTTGTCATCAATAATTTGTTACATGTGTGATGCCATCGAAAATGGTGATGAAACCGATAAAGTTTATATTGTATACATGGGTTCACTTCCTAAGGATGCATCATATTCTCCGACCTCTCACCATTTTAGCATGTTGCAACAAGTTGTTTATGGTAATGATGTAGAAAATCGTTTGGTTCAAAGTTACAAGAGGAGTTTTAATGGTTTTTCTGCCATACTCAATGATCAACAAAGGGAAAAACTTGCTGGCATGAAAGGTGTTGTCTCAGTATTTCCAAGTCAGGAGTATCACCTTCAAACTACAAGATCGTGGGACTTTCTTGGTTTACCTCAATCAATCAAAAGAGGTAAAACTGTTGAGAGTGATTTGGTGATTGGAATCATAGACACCGGAATTTGGCCAGAATCTCAAAGTTTTAACGATAAAGGTCTGGGTCCTATTCCAAAAAAGTGGAGGGGGCTTTGTGCAGGTGGTGGTAACTTCAGTTGCAACAATAAGATCATTGGAGCACGATGGTACCCTGGTAGTGTCGATGCAAGAGACCATTTTGGTCATGGAACACATGTTGCATCAATAGTAGGCGGAAGAAGGATAAATGGTGTGGGCTATCATGGTCTTGCAAAAGGCACCATAAGAGGAGGAGTTCCATCTTCAAGAATTGCTGTATACAAAGTTTGTAACCCAAATTGTCGTGATGATAATATTTTAGCAGCTTTTGATGATGCCATTGCTGATGGAGTTGACATCATTAACCTATCTCTTGCTAACGTAAATGCTGTTGAAATTCTTAAAGATCCTCTTGCTATTGGTTCATTTCATGCCATGGAAAAAGGAATACTCACAGTGCAAGGAGCAGGCAACAATGGCCCTAACCCAAGTACTATTTCAAGTGTAGCACCGTGGTTATTTAGTGTGGCCGCAACTACCATAGATCGTCAATTTATTGATAAACTCATTCTTGGAAATGGAAAAACTTTTATTGGAAAGTCGATTAATATTGTCCCATCAAATGGCACAAAATTTCCGATAGTTGTGTGTAGTGCTATGACTTGCCATGGAAATTATACATCCCCTGAAAAATGTCGATGTATAGACAAAAAACTGGTAAAGGGTAAGATTGTTTTGAGTGTAGATGCAACTGGTGGATATTTGGCTTATCAACATGGGGCAATCGGTTCAATCATTAATTTTACATATGATCGTTCTTTTATCACTCATCGACCTTCACTTGACCTGAATTCAGAAGACTTTGATCGTGTTCAATCTTATACTTACTCCACTAAATACCCTGTAGCTGAAATATTGAAGAGTGATGTCGTTCAAGACACCACTGCTCCTAAAGTTGCAAGTTTTTCTTCTCGTGGTCCAAATCCAATTGTACCAGAAATTATGAAACCAGATATAGGTGCCCCTGGAGTTAATATCTTGGCTGCATATTCACCTAATGGACCAAGCTCTGATGATGCTATTTTTAACGCATATGAGAAATACATTATAGCATCTGGTACCTCTATGGCATGTCCTCATGTTGCCGGAGTTGCCGCATATGTCAAATCATTTCATCCAGATTGGTCACCTGCAGGTATCAAATCTGCCATCATGACCACGACGAAACCAGTGAATGGTACCTATAATGATATGTTAGGTGAGTTTGCTTACGGATCTGGAAATATCAATCCACAACAAGCTCTTCACCCTGGACTGATTTATGACATCACTAAGCAAGATTATATGCAAATGCTTTGTAATTTTGGTTATAATGATACCAAAGTTGAACAAATTAGTGGAGAAAAATCAAGTTGTCATAAAGCTTCAAATAGATATTTGGTGAAAGATATAAATTATCCCGCACTGGTGATTCTTGTTAGGAGGCCTCATAAGCGCTTTAGTGGTAAGATTCATAGAACAGTGACAAACGTTGGCTCTCCTAACTCAACCTACACGGCAACTATCATCCCGATTCCAAAAATCAAGATTAAAGTGGTGCCGAAACTTCTGTCATTCAAATCCTTACATGAGAAACAATCCTTTGTTGTTATTGTTACCGGAGGAGCAAACTCAAATCAAACTATGTTTTCTTCGTCACTTGTTTGGTCAGATGGAACCCACAATGTAAAGAGTCCAATCATTATAAAAAGACTCTCTTAA 2193 0.3839 MAKHHVVLFFFVYLVLSSIICYMCDAIENGDETDKVYIVYMGSLPKDASYSPTSHHFSMLQQVVYGNDVENRLVQSYKRSFNGFSAILNDQQREKLAGMKGVVSVFPSQEYHLQTTRSWDFLGLPQSIKRGKTVESDLVIGIIDTGIWPESQSFNDKGLGPIPKKWRGLCAGGGNFSCNNKIIGARWYPGSVDARDHFGHGTHVASIVGGRRINGVGYHGLAKGTIRGGVPSSRIAVYKVCNPNCRDDNILAAFDDAIADGVDIINLSLANVNAVEILKDPLAIGSFHAMEKGILTVQGAGNNGPNPSTISSVAPWLFSVAATTIDRQFIDKLILGNGKTFIGKSINIVPSNGTKFPIVVCSAMTCHGNYTSPEKCRCIDKKLVKGKIVLSVDATGGYLAYQHGAIGSIINFTYDRSFITHRPSLDLNSEDFDRVQSYTYSTKYPVAEILKSDVVQDTTAPKVASFSSRGPNPIVPEIMKPDIGAPGVNILAAYSPNGPSSDDAIFNAYEKYIIASGTSMACPHVAGVAAYVKSFHPDWSPAGIKSAIMTTTKPVNGTYNDMLGEFAYGSGNINPQQALHPGLIYDITKQDYMQMLCNFGYNDTKVEQISGEKSSCHKASNRYLVKDINYPALVILVRRPHKRFSGKIHRTVTNVGSPNSTYTATIIPIPKIKIKVVPKLLSFKSLHEKQSFVVIVTGGANSNQTMFSSSLVWSDGTHNVKSPIIIKRLS* 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3351 730 ProSiteProfiles Serine proteases, subtilase domain profile. 110 579 - -
Tpr6g3351 730 PRINTS Subtilisin serine protease family (S8) signature 135 154 IPR015500 -
Tpr6g3351 730 PRINTS Subtilisin serine protease family (S8) signature 196 209 IPR015500 -
Tpr6g3351 730 PRINTS Subtilisin serine protease family (S8) signature 516 532 IPR015500 -
Tpr6g3351 730 ProSitePatterns Serine proteases, subtilase family, serine active site. 517 527 IPR023828 -
Tpr6g3351 730 CDD PA_subtilisin_like 333 449 - -
Tpr6g3351 730 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 23 114 IPR037045 -
Tpr6g3351 730 Pfam Subtilase family 136 569 IPR000209 GO:0006508|GO:0008236
Tpr6g3351 730 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 35 728 IPR045051 -
Tpr6g3351 730 Pfam Fibronectin type-III domain 627 726 IPR041469 -
Tpr6g3351 730 SUPERFAMILY Subtilisin-like 116 579 IPR036852 GO:0004252|GO:0006508
Tpr6g3351 730 CDD Peptidases_S8_3 111 551 IPR034197 -
Tpr6g3351 730 Gene3D Peptidase S8/S53 domain 137 592 IPR036852 GO:0004252|GO:0006508
Tpr6g3351 730 Pfam Peptidase inhibitor I9 36 113 IPR010259 -
Tpr6g3351 730 Gene3D - 596 729 - -
Tpr6g3351 730 Gene3D - 326 456 - -
Tpr6g3351 730 ProSitePatterns Serine proteases, subtilase family, histidine active site. 200 210 IPR022398 -
Tpr6g3351 730 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.3 35 728 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3351 Tpr-Chr6 36163112 36168682 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3351 9 726 Subtilisin-like Serine Gene Family AT5G59130 51.032 0.0 717
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3351 - - mtr:MTR_1g006990 979.163