Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3350 ATGGTAAAAATTGATGAATCTCTAGATGTTGATTCGAATGAAGTTAGTTCAACCGATAGTCATACATCTGATGATGAGGATTCCAGCTATTCGGTGTCCGGTGGGCATGATAGGTCAGATGATGGCGATGATACTAGTGACCACCATGATGATGATGATGCATCTATAGGTGAAAGAGCGGTACGTATTAATTCTATGACTGCTGATGAAATTCGTGGTATGGAATTTGGTAGTGTTGACGAAGCTTATGAATTTTATTATCAATACGGTAAATGTAAAGGTTTTTCCGTTAGGAAAAGTGATGATAAGAAAAAAATAGGGCCTGATGGTAGTAAAATAATAACAAACAAGCTTTTTGTATGCAGTAGACAAGGTTTACGAGATAAGAGACACATATCTAGGTTAGATAGGAAAAGAGAGCATAGACGTTTGACACGTACGAAATGCACGGCTAGGTTTCGTGTGACATACAAAGCCGATAAGGGTAGATTTGTAGTGTCTGTGTTTGAAGAGACTCATAACCATGAATTAACATCAGCTAGGTTTGTGCACTTACACCCGGTTTATCGTAAAATTAGCGAAGCAGATAGAGCTCAGGTTGATGGTATGCAGTCACGTGGAATTAGAACTTGTCATATTATGGGGTACATGGTTGCTCAGAAGGGTGGATATGGTGGTGTTGGGTTTACGAAGAAAGATCTTTATAATTATTTTGATAAAAAAATGCGTGATATTGTTAAAGATGGTGATGTTGCCGCATCGCTACATTATCTTAATGCAAAGTCAGCTACTGATCCCATGCTCTATGCTGAATATGCTGCAGCTGCTGACACTAGCAATGGACGAATGAAGTCTCTTTTTTGGGCTGATGGGACCAGTAGATCTGACTACTTCTGTTTTGGAGATGTGGTTGCATTTGACACAACATACAAGAGGAACAAATACAACCTCCCGCTGGTTATATTTTCAGGTTGTAACCACCATTCCCAAACAATAATTTTTGGCGCTGCGTTGGTATCAGATGAAACCACGGAGACGTATAAGTGGGTGTTGAATTGTTTTTTGGAGTGTATGGAAAATAAACGCCCAAAAGCTGTGGTGACAGATGGAGATGGGGCTATGAGGGAGGCTATAAAAGAGGTTTTCCCCGATGCGACCCATCGGTTATGTGCCTGCATTTGA 1182 0.4027 MVKIDESLDVDSNEVSSTDSHTSDDEDSSYSVSGGHDRSDDGDDTSDHHDDDDASIGERAVRINSMTADEIRGMEFGSVDEAYEFYYQYGKCKGFSVRKSDDKKKIGPDGSKIITNKLFVCSRQGLRDKRHISRLDRKREHRRLTRTKCTARFRVTYKADKGRFVVSVFEETHNHELTSARFVHLHPVYRKISEADRAQVDGMQSRGIRTCHIMGYMVAQKGGYGGVGFTKKDLYNYFDKKMRDIVKDGDVAASLHYLNAKSATDPMLYAEYAAAADTSNGRMKSLFWADGTSRSDYFCFGDVVAFDTTYKRNKYNLPLVIFSGCNHHSQTIIFGAALVSDETTETYKWVLNCFLECMENKRPKAVVTDGDGAMREAIKEVFPDATHRLCACI* 394
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3350 393 PANTHER OS02G0262500 PROTEIN 70 391 - -
Tpr6g3350 393 MobiDBLite consensus disorder prediction 18 58 - -
Tpr6g3350 393 Pfam MULE transposase domain 303 391 IPR018289 -
Tpr6g3350 393 Pfam FAR1 DNA-binding domain 84 178 IPR004330 -
Tpr6g3350 393 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 70 391 IPR031052 GO:0006355
Tpr6g3350 393 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Tpr6g3350 Tpr-Chr6 36157120 36158355 Transposed
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr6g3350 FAR1 3.9e-17 CL0274
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3350 - - ccaj:109792835 452.981