Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3345 ATGGATCCTAATCATTTTCATTATCAACAAGCTATGTTCAATTTCATGCAAAATTATCAAAATCCTAATCCTCAAAATTCTCAAATTCCACCGATGCCACCATTTTCTACTCAAGTTCCACCATTTTCTACTCAAGTTGGTACTGAAAAAGAAGAAAGGGTTGTTGTTAAAAAAAAATCTCGAGAGCAATTTGCAAGGGATGAGGATATACTACTTATCCAATCATGGCTCAATGTTTCAAAGGATCCAATTGTGGGAGTTGATCAAAAGGCTGAGAGTTTTTGGGTAAGAGTCGCTGCCAATTATAACCAGTATCGTGGGGAATCGCGGGAAAAGTTAAAGGGACAATTAAAATGTCGATGGCATCGAATAAATGGCTTGGTTCAAAAATTTGTTGGGTGTTACAAACAAGCTGTTAATGGAAAGAAAAGTGGGACATCGGAGAACGATGTCATGGCCGCTGCAAATGCATTTTTTGCTCAGGATCAAGGTACAACATTCAACCTTGAGTACGCATGGAGATTGTTAAAAGATGAACCTAAATGGATGGGAGAATCGATTGAAAGTTCTTCAAAAATAACAAAGACTTATGCTAGTGAGGCATCATCGGAGAACCCAAATACACCTTCAAGTTATGAGTTTAACTCATCATCACCAATGGAGCCAGAACGTCTTGCATTGTGGTCTGGCTTGTCTTCGGTGTCATCTGCTGTTAGTCATAAAAGATTGCACAAAAGGTGTGCAACTCATGTTTACATCAGTCATACGATTCGGAGTATAGAGTTGCCAAAACAAAGAGTTATCAAAGAGTCTAAGCTTCGTGAATGTCGTGAAACGAGAGCACACGAAGGGTCAAAGAGTGGAGTTCCTTTCCAAGTACACAACTTGAACAGAGTTACTTGTGAAACTGTGAGGAATCATAATGAAAGTAAGAATAGTATTCTTTTGCAGCAATGCCACTATGGTGAGATATCACAGGCTGCTCCAAGACCTGGAGTATATGATCCTCAAAAGCAATTAAGCTCGAGGTTTATTTCGCTGATAAAAGACGGAGGAGGTACTATGCTCGAAGCAAAGGGTCTTTACAAAGAGGCTCTAAAATCTTTTCGTGATGCTTTGAACCTTGATCCTACACATGTCCCTAGCTTGATTGATATCAACTGCGGCCGTTCTTAG 1176 0.3963 MDPNHFHYQQAMFNFMQNYQNPNPQNSQIPPMPPFSTQVPPFSTQVGTEKEERVVVKKKSREQFARDEDILLIQSWLNVSKDPIVGVDQKAESFWVRVAANYNQYRGESREKLKGQLKCRWHRINGLVQKFVGCYKQAVNGKKSGTSENDVMAAANAFFAQDQGTTFNLEYAWRLLKDEPKWMGESIESSSKITKTYASEASSENPNTPSSYEFNSSSPMEPERLALWSGLSSVSSAVSHKRLHKRCATHVYISHTIRSIELPKQRVIKESKLRECRETRAHEGSKSGVPFQVHNLNRVTCETVRNHNESKNSILLQQCHYGEISQAAPRPGVYDPQKQLSSRFISLIKDGGGTMLEAKGLYKEALKSFRDALNLDPTHVPSLIDINCGRS* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3345 391 ProSiteProfiles TPR repeat profile. 346 379 IPR019734 GO:0005515
Tpr6g3345 391 MobiDBLite consensus disorder prediction 197 216 - -
Tpr6g3345 391 PANTHER OS07G0575233 PROTEIN 26 221 - -
Tpr6g3345 391 PANTHER - 26 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3345 Tpr-Chr6 36088423 36091203 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3345 3 192 Glutathione S-transferase Gene Family AT5G41240 31.313 2.75e-22 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3345 - - cam:101493921 254.988