Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tpr6g3328 | ATGGAGGAATTGTTTATGACTGATGTTGAAGAGGGTAATCAACAACAGCCAGAGCTAGCTCTAGTAGGTTCAAGTTGTCTGTTTTGTATTGTATGGAGAGGGAGCCTATATATCGCTAACGTTGGAGACTCCCGTGCTGTAATGGGTTATTTGGATCCATTTAATAGATTCAATATTCGGCAGTTAGTCGAAGATCACAATGCTCGTAATCGTAACAGGCATATTAAAAAAGAACTCGAGAAGTTGCATCCAAAAGATCCGACTACTGTGACTTATAATTTTGACGCATGGCGTGTTCGAGGCATAAGTGAAATAAGCAGTTGTATAAGAAATGCATATTTGAAGCGGGCACCGTTCACTTTAACCTCATCCTTCCGAGTCCCACAGTCGGAACTTGCACCTTCTGATTTTTCCCAACCTTTGCTATCAGCAGAACCTGCAATATCTTCAAGAGTCTTAAATGACGTTGATAAATTCATTATATTTGGATCTGGTGGACTTTGGAAATTGTTGTCAAATTGGCAAGCAGCTGAAATTGTTCACACCAATCCACGAGATGGAATCGCGAAAAGGATTTTGATGACTGCTCTACAGATTGCAGCTAAATGA | 609 | 0.4039 | MEELFMTDVEEGNQQQPELALVGSSCLFCIVWRGSLYIANVGDSRAVMGYLDPFNRFNIRQLVEDHNARNRNRHIKKELEKLHPKDPTTVTYNFDAWRVRGISEISSCIRNAYLKRAPFTLTSSFRVPQSELAPSDFSQPLLSAEPAISSRVLNDVDKFIIFGSGGLWKLLSNWQAAEIVHTNPRDGIAKRILMTALQIAAK* | 203 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tpr6g3328 | 202 | ProSiteProfiles | PPM-type phosphatase domain profile. | 1 | 202 | IPR001932 | - | |
| Tpr6g3328 | 202 | SUPERFAMILY | PP2C-like | 13 | 198 | IPR036457 | - | |
| Tpr6g3328 | 202 | PANTHER | ALPHABET, ISOFORM E-RELATED | 1 | 201 | - | - | |
| Tpr6g3328 | 202 | PANTHER | PROTEIN PHOSPHATASE 2C 68-RELATED | 1 | 201 | - | - | |
| Tpr6g3328 | 202 | CDD | PP2Cc | 13 | 202 | IPR001932 | - | |
| Tpr6g3328 | 202 | Gene3D | - | 1 | 202 | IPR036457 | - | |
| Tpr6g3328 | 202 | Pfam | Protein phosphatase 2C | 16 | 192 | IPR001932 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Tpr6g3328 | Tpr-Chr6 | 35896718 | 35900868 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Tpr6g3328 | 2 | 202 | PP2C-type Phosphatase Gene Family | AT5G06750 | 45.366 | 4.22e-53 | 172 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tpr6g3328 | K01102 | - | pvy:116121639 | 183.341 |