Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3320 ATGGATCATGTGATTGGTGGGAAGTTTAAATTGGGAAGGAAAATTGGAAGTGGGTCTTTTGGGGAGCTATATATAGCTGTTAATGTACAAACTGGAGAGGAAGTTGCTGTTAAGCTGGAGCCTGTGAAGACCAAGCATCCACAGCTTCACTATGAATCAAAATTGTATATGCTACTCCAAGGAGGAACGGGGGTGCCTCACCTCAAGTGGTTTGGAGTTGAGGGAGAGTACAACGTGATGGCAATTGACCTTCTTGGACCCAGTCTGGAAGATCTGTTCAATTATTGCAACCGGAAGTTAACATTGAAGTCGGTATTAATGCTTGCTGATCAATTAATTAACAGAGTTGAATATATGCATTCAAGAGGTTTCCTTCACCGTGACATAAAGCCAGACAATTTTTTAATGGGCCTAGGACGTAAAGCAAACCAGGTCTACATCATTGACTATGGCCTCGCCAAAAAATTCAGAGATCTTCAGACTCATAAGCACATACCATACCGGGAAAACAAGAACCTTACAGGGACAGCTCGGTATGCGAGTGTCAACACTCACCTTGGAATCGAACAAAGCAGAAGGGATGATCTGGAATCTCTTGGTTATGTTCTCATGTACTTCTTAAGAGGAAGTCTTCCTTGGCAAGGACTGAAGGCGGGCACCAAAAAACAAAAATATGATAAAATAAGTGAGAAGAAGATGGCAACTTCCATAGAAGCGCTCTGCAAATCATATCCCTCAGAGTTTGTATCATACTTTCACTACTGCCGATCATTGCGGTTTGAAGACAAGCCCGACTATTCATATTTGAAGAGGCTTTTTCGAGATCTATTTATACGAGAAGGTTATCAATTTGACTATGTTTTCGACTGGACTATATTGAAGTATCCACAGATTAGTGGCAGTTCTAGAGGGCGGCATGACAGTGGCAAGGCGGCTATGAATGCAGGGCCATCTGTACAGAAGCCAGAAAAGATCTCAGTTGGGAAAGAGCTTCGAGAGAGATTCACTGGTGCTGTTGAAGCATTCTCGCGGAGGAACCCAAGTCCCCGTGGTGAACACTCCAAACATAGGGGTTATGAGGAGGCAGCAGCCATACACAAGGATGTGTATCATGATCAAGAGAAGGGACGCAGTTCCGCTCGATATGGAAGCAGTTCAAGAAGACCAATAATTTCATCATCAACGAGGCCAAGCTCCTCAGGTGATCATACAGACAGTCGTACTGGCCGGCTGACCTCATCTGTTAGCCGTCCATCTACCACACAGAGAATTCAACCTGTGTATGAGACCAAACAGCCAACCTACACGCGGTCGGGATCTACTAGAGGCAACCGCGATGATCCTCTGCGGAGTTTTGAACTCCTTTCTATCAGGAAGTAG 1380 0.4471 MDHVIGGKFKLGRKIGSGSFGELYIAVNVQTGEEVAVKLEPVKTKHPQLHYESKLYMLLQGGTGVPHLKWFGVEGEYNVMAIDLLGPSLEDLFNYCNRKLTLKSVLMLADQLINRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYIIDYGLAKKFRDLQTHKHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYDKISEKKMATSIEALCKSYPSEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTILKYPQISGSSRGRHDSGKAAMNAGPSVQKPEKISVGKELRERFTGAVEAFSRRNPSPRGEHSKHRGYEEAAAIHKDVYHDQEKGRSSARYGSSSRRPIISSSTRPSSSGDHTDSRTGRLTSSVSRPSTTQRIQPVYETKQPTYTRSGSTRGNRDDPLRSFELLSIRK* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3320 459 SUPERFAMILY Protein kinase-like (PK-like) 4 290 IPR011009 -
Tpr6g3320 459 PANTHER CASEIN KINASE I-LIKE PROTEIN 1 448 - -
Tpr6g3320 459 Pfam Protein kinase domain 10 228 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3320 459 MobiDBLite consensus disorder prediction 379 442 - -
Tpr6g3320 459 SMART serkin_6 9 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3320 459 MobiDBLite consensus disorder prediction 443 459 - -
Tpr6g3320 459 Gene3D Transferase(Phosphotransferase) domain 1 1 335 - -
Tpr6g3320 459 PANTHER CASEIN KINASE-RELATED 1 448 - -
Tpr6g3320 459 MobiDBLite consensus disorder prediction 346 378 - -
Tpr6g3320 459 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3320 459 MobiDBLite consensus disorder prediction 325 339 - -
Tpr6g3320 459 MobiDBLite consensus disorder prediction 300 459 - -
Tpr6g3320 459 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Tpr6g3320 459 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Tpr6g3320 459 CDD STKc_CK1_delta_epsilon 8 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3320 Tpr-Chr6 35820453 35825778 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3320 7 227 CBL-interacting serine-threonine protein kinases AT4G24400 28.947 2.46e-12 66.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Tpr6g3320 Pkinase 1.1e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3320 K08960 - cam:101493293 842.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3320 6 35820453 35825778 Tpr6g3320 6 35820453 35825778 ECH
Tpr6g3320 6 35820453 35825778 Tpr1g4027 1 45339293 45346674 PCT