Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tpr6g3280 | ATGGCCTCATCTTTGGAGGACCTTCTTCGAGAAGAAGGATTCAAAGGAAGCAGCAAAAGAGTGCAAAGGTCAAGATCTTCCTTCCACCATGGTGCTTCAAGTGATCCACTTCACTCTTTAGAAGAGAGACTCTGTGTATCATCAAGTGAAAGAATCAAAACACAGAAAACAAAGTCTAAAGCAGCCTCAAGATATCAGATTAACAATACAAGAGACAATAAGAACACAAGATCAAGGGATAATAATAATGTTTTTATAGGAAACGAGATAAATCACGGACTGTTGAAAAACGATGAATCTGAGAAGAACAAGTCTTATAATTCATCAGAGAGTGATAGTGGATTTGAAGATGTTTATTCAGATCAAGTATCTGATGTGAAAAGAGGCAAAGACAAGTATTTTAAGGAAAAATTGGTTGAAAAGCCAATCAAGGATTCATATATGCTTAGACAATTGAGTGGAAATAGAAAGAATATAAAATACCAAAAAAATTCCCAAACTATATCTAATAGTAATAGCAAAAGCTTTGAGAATAGCAGGAACAAAAATAGCCATCAATTGCAAGCTGATTCTAGTCTGGCTATTGATGAAATTGCTGTGAAAGCACTAGTTTCCATTCTGAATGGATACACAGAAAGTTTCCTAAAAGACGAAGATTTTCGATCTGCGTTGCGCCACAATTGTTTCTCCTCCTTGAATTTTATTCAACTTGAGGAGGAAGAAAACAATTCTGAGACCAAAGTGATTACAAGTCTTGAGCAAGCAATTGACTGCATAGAAAAAACTGCTTGCGAGGAAGAACCTAAATCTGCAACAAATCTGAAAAGAGCAACAATGCAGCTTAGCATTATTGCAGGTTTGAGTTTGAATGATCTCAAGCACGATCTTACGTGCGGAATACCGAATTTCAAGTTATCAGCTTGTGCTCATCTTTACCTCAGTGTGGTTTATATGATACAAATAAAAAATAAAGTTTCGGCTAAGCATCTTTTGCAAGTCTTTTGTGATTCGCCTTTTCAGGCACGAACAATATTGTTGCCTGAACTTTGGGAACGTCTATTTTCTCCGCAATTTTCTCATTTGAAGAAATGGTATAACAACAAGGAAGGTGAAATTGTTGTAGATACACCAAGCAGAAAACCAAGAAAGTTAAAGATTCTTCAAAAAGTGTATAATGAAAATTTGGATTCAGGAACTCAAATTTTTGCTTTATATTACAAAGATTGGCTCAGTGAAGGAGTAGAAACTCCAACTATTCCTTCTATTGGAATTCCATCATTTTCTGTTACGAGTCGACAGGGAAGTTCATTTGCTCATTCTTTTGAGTCTGCTAGCTCAAATGAACCATTCTCACCACAAGCAATGGTCAGCAAGAAGCTATATGATTCTTTCTTTGGTGGATATAGTAAACCTCAAGTCTATGTTGTTGATGAAGATAAGGATGAAGATAGTTATGAAAATTGTGAGAGAGGCTCTTATGGTTCAACTGTCGTTAAAAAAACAGTAATATATGAATCCGAAACTGTTAAATTTATTGATCAAAGTGATGAAGATTTCACTCCAAGTGTTCCGGTTCATGCATTCCATCCTCAGAAAGGAACATCAAGGACAGCTGCAGAAGAATGGAAAGAGAAGAATTCCAGAAATGCTACTAGAAAATATTTCTCCATAGAAACTAATTTAAACAGTCACATAGTTGATCCTCTACCACATGAAAAAGCAAATGAAATTTCTCTCAGAAAGATGCAGACAAATATGATAAACCCTACTCTTGAAGGATCATATTTTCCAAGCATACCACAGGAATTTATTTGTCCACTGACAAGAAAGATCTTCGAGGAACCAGTCACCTTAGAATCTGGTCAAACCTTTGAAAGAAAAGCCATCAAGGCATGGTTTCAAAAAGGAAACAGAACATGTCCAGTAACAGGAAATAGTTTAGAGTGTGTTTTCATGCCATTTACCAACCTTATTTTGAAGCGTTTGATCGATAACTGGAAGTCAGAAGATTTTGATCGCCTTCTTGATTTCGCCTCTCAAACCGTGGAAAATTCAGAGGAACTTAAGTTGAAAAAGCATGACGAGGCTACCGTTTTCAAGTTACAAAGTCTTTTCTCTTCCTTGAAAGAAGAGGAAAAATCAAGTTATGCGAAGCATATAATCTCTCTAGGAGTTTTTTCATTTCTTTTTAGGAGATTTGAACTGGGAAATATGGAAGAAAAATCACTTGTTTTGGAGATCTTGTTAAATTGTATTCAAGCAGACTCAAGTTGCATATACAAGATAGCTAGAAGTGTCAACAGAAAATTTCTTCTCGAGCTTCTTCATAGCAAGGAGATTACACCTAGAACAAACGCATTTCTCTTCCTTACTGAACTTTTGTCAATGAAGAGGAGAAAGGATGTTACTTCTTTCATAAGTGGTTTGGTGAGTGAAGATGTATTTAGTACAATGGATATTGTGCTCATGTATCTCAAGAATTCTTCTCCAATTGAAAAGCCTCTCATTGCTGTTCTCTTATTACACTTTGATCTACCGGTTGAGCAGCATCAAAAGATTAGCATATACATAGAGAATGCCGTGAATGCCATTGCAGAGGCACTGGATGCCAGCTTAAATGACGGGAATGTCCAAAAGAAGTGTTGCAGAGCTCTATTAATCTTGTGTGGCCATTTTTCTTCCACTGGAAAGATACCAACCAAGACTACCATCTTAAAGCAAGCAGGTTATAATAATGGTATCTCAGAATTGAAATCCCCTAGCCATGATGAAGAGGATCAACGTTTCGATATAACCATTTCATCGGAAGATGATGAAGAAGAAGAAGAAAGGCATGAAGAGTTCATGATGAACTTGTTAGAAACATTGGTTGGTGATGGAGAAAGTCCATTTTTGAAGAGCATATCTAGATGTTTAGATTCTACACATGTAGATTTAGTGAGGGCTAGTCTAATAACTGTTACATGGTTGAGTTCCTCACTTTCTAAACAATATAATGCTGGATTGCATCTTCCTGCATTCTTAGCTATCATCTCTCAGCTTAAAGGAATCCTGCAAAATGGAGAACTTGAGCTCAAAACTCTTGCATCTATGTCCTTGTTTAACTTCAGTAAAATATCAGAATGCAGAACACTTTTGAAGATTATGGCAGAAGATATTGCTCCTCTTCTTCATGGACTAGTTGATGTAATATGGACTGCTAAGAAACTTCATGCCATTTTGTGTAGGGAGAATCTCTAG | 3240 | 0.363 | MASSLEDLLREEGFKGSSKRVQRSRSSFHHGASSDPLHSLEERLCVSSSERIKTQKTKSKAASRYQINNTRDNKNTRSRDNNNVFIGNEINHGLLKNDESEKNKSYNSSESDSGFEDVYSDQVSDVKRGKDKYFKEKLVEKPIKDSYMLRQLSGNRKNIKYQKNSQTISNSNSKSFENSRNKNSHQLQADSSLAIDEIAVKALVSILNGYTESFLKDEDFRSALRHNCFSSLNFIQLEEEENNSETKVITSLEQAIDCIEKTACEEEPKSATNLKRATMQLSIIAGLSLNDLKHDLTCGIPNFKLSACAHLYLSVVYMIQIKNKVSAKHLLQVFCDSPFQARTILLPELWERLFSPQFSHLKKWYNNKEGEIVVDTPSRKPRKLKILQKVYNENLDSGTQIFALYYKDWLSEGVETPTIPSIGIPSFSVTSRQGSSFAHSFESASSNEPFSPQAMVSKKLYDSFFGGYSKPQVYVVDEDKDEDSYENCERGSYGSTVVKKTVIYESETVKFIDQSDEDFTPSVPVHAFHPQKGTSRTAAEEWKEKNSRNATRKYFSIETNLNSHIVDPLPHEKANEISLRKMQTNMINPTLEGSYFPSIPQEFICPLTRKIFEEPVTLESGQTFERKAIKAWFQKGNRTCPVTGNSLECVFMPFTNLILKRLIDNWKSEDFDRLLDFASQTVENSEELKLKKHDEATVFKLQSLFSSLKEEEKSSYAKHIISLGVFSFLFRRFELGNMEEKSLVLEILLNCIQADSSCIYKIARSVNRKFLLELLHSKEITPRTNAFLFLTELLSMKRRKDVTSFISGLVSEDVFSTMDIVLMYLKNSSPIEKPLIAVLLLHFDLPVEQHQKISIYIENAVNAIAEALDASLNDGNVQKKCCRALLILCGHFSSTGKIPTKTTILKQAGYNNGISELKSPSHDEEDQRFDITISSEDDEEEEERHEEFMMNLLETLVGDGESPFLKSISRCLDSTHVDLVRASLITVTWLSSSLSKQYNAGLHLPAFLAIISQLKGILQNGELELKTLASMSLFNFSKISECRTLLKIMAEDIAPLLHGLVDVIWTAKKLHAILCRENL* | 1080 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tpr6g3280 | 1079 | ProSiteProfiles | U-box domain profile. | 598 | 673 | IPR003613 | GO:0004842|GO:0016567 | |
| Tpr6g3280 | 1079 | CDD | RING-Ubox_PUB | 603 | 644 | IPR045210 | - | |
| Tpr6g3280 | 1079 | MobiDBLite | consensus disorder prediction | 1 | 84 | - | - | |
| Tpr6g3280 | 1079 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 598 | 671 | IPR013083 | - | |
| Tpr6g3280 | 1079 | SMART | Ubox_2 | 602 | 666 | IPR003613 | GO:0004842|GO:0016567 | |
| Tpr6g3280 | 1079 | Coils | Coil | 235 | 255 | - | - | |
| Tpr6g3280 | 1079 | SUPERFAMILY | ARM repeat | 711 | 1061 | IPR016024 | - | |
| Tpr6g3280 | 1079 | SUPERFAMILY | RING/U-box | 594 | 669 | - | - | |
| Tpr6g3280 | 1079 | PANTHER | OS04G0584500 PROTEIN | 1 | 1077 | - | - | |
| Tpr6g3280 | 1079 | Gene3D | - | 688 | 1073 | IPR011989 | - |
Showing 1 to 10 of 14 entries
Duplication type information
Functional genes information
Pathway information