Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3254 ATGGCTGAAATGCAATACTATATCCAACTTTTTTTAGTTTTGCTACTCTCCACCATTGCAATTATTCGAGCCATACTTACCAGAAAGAAGAAGAAGAAGAACAACAAGATTAATCATCTTACACCACCAAGAACCCCTCTTGCCTTACCTATCATTGGACACTTTTACCTTTTATCTAAGTTACCAGTTCACCAAAATTTTCACAACCTTTCAATTCAATATGGACCTATAATGAAACTTTTCCTAGGTTATGTCCCTTGTGTAGTAATTTCAAGTCCAGAAATAACAAAGGAGTTTCTTAAAACTCATGAAACTTCCTTCTCAAATCGCTTAATAAATCATGTAGTTCACTACTTATCATATGGTTCAAAAGATTTCATGTTTGCACCTTATGGTGACTATTGGAAATTCATGAAAAAATTATGCATGTCAGAACTTCTTGGTGGAAAAACTCTTGATCAATTCTGTCCCTTGAGACAACAAGAGACTTTGAGGTTACTTAGAGTTTTGCATAAGAAAGCGAAAGCCGGTCGGGAGGCGGTTGATGTTGGTGCCGAGCTCTTGACACTAACTAATAGAATTATGACAAGGATGACAATAAGTAGAGCTTGTTGTGAAAATGATTGTGATGTTGAAGAGATTAGGAAGTTGGTTCAAGATTCTTCAGAACTTGCAGGGAAGTTTAATTTGTCTGATTTTATTTGGTTTTTTAAGAATTGGGATTTGCAGGGATTTAATAAAAGGCTAAAAGAGATGATGGAGAGGTTTGACACAATGATTGAGAGAGTGATAAGGGAGCATCAAGAGGATATGATGAAGAAAAGAAAGGAAAATGGTGAAGGTGCTTATGTTAAGGATCTACTTGATATTTTGTTGGAAATTCAAGAGAATGAGAACTCTGAGATGAAGTTAACTAGAGAAAATGTCAAGGCTTTCATCTTTGACATGTTTTTAGCAGGAACAGACACATCTTCTACAACAATTGATTGGGCTCTAGCTGAATTAATAAACAACTCACATGTGATGGAGAAAGTAAGACAAGAGATTGATTCACTAACAAGAAAAAGTAGATTAATACAAGAATCCGATCTTCCGAATCTTCCATATCTTCGAGCTATACTAAAAGAAACACTAAGATTACACCCTACAATACCATTAATGGTTAGAGAATCATCTAAGAGTTGTAATGTTAGTGGTTTTGAGATACCAGCAAAGACTATTTTATATGTTAACTTTTGGTCAATGGGTAGGAACCCTAAATTGTGGGAGAATCCACTTGAGTTTAAGCCAGAAAGGTTTATGAGTGAAGAGAATAAGTTTGATGTGAGGGGACAAAATTTTCAATTTATTCCATTTGGAACTGGAATAAGATTTTGCACTGGTACCTCATTAGCACTTCAAGTTGTTCCAACAAATCTTGCTGCATTGATTCAATGTTTTGAATGGAAGGTTGGTGGTAATGGAAAAGTTAACATGGAAGAGAAACCTTCTACTATCCTTAGAAGGGCTCATCCTTTGATGTGTGTCCCTATTCCTCGTTTTAATTTATTTTCTTTTGACGAGTAG 1566 0.3525 MAEMQYYIQLFLVLLLSTIAIIRAILTRKKKKKNNKINHLTPPRTPLALPIIGHFYLLSKLPVHQNFHNLSIQYGPIMKLFLGYVPCVVISSPEITKEFLKTHETSFSNRLINHVVHYLSYGSKDFMFAPYGDYWKFMKKLCMSELLGGKTLDQFCPLRQQETLRLLRVLHKKAKAGREAVDVGAELLTLTNRIMTRMTISRACCENDCDVEEIRKLVQDSSELAGKFNLSDFIWFFKNWDLQGFNKRLKEMMERFDTMIERVIREHQEDMMKKRKENGEGAYVKDLLDILLEIQENENSEMKLTRENVKAFIFDMFLAGTDTSSTTIDWALAELINNSHVMEKVRQEIDSLTRKSRLIQESDLPNLPYLRAILKETLRLHPTIPLMVRESSKSCNVSGFEIPAKTILYVNFWSMGRNPKLWENPLEFKPERFMSEENKFDVRGQNFQFIPFGTGIRFCTGTSLALQVVPTNLAALIQCFEWKVGGNGKVNMEEKPSTILRRAHPLMCVPIPRFNLFSFDE* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3254 521 Coils Coil 246 266 - -
Tpr6g3254 521 SUPERFAMILY Cytochrome P450 45 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g3254 521 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 3 518 - -
Tpr6g3254 521 PANTHER CYTOCHROME P450 FAMILY PROTEIN 3 518 - -
Tpr6g3254 521 Gene3D Cytochrome P450 26 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g3254 521 Coils Coil 342 362 - -
Tpr6g3254 521 Pfam Cytochrome P450 43 505 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g3254 521 PRINTS P450 superfamily signature 319 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g3254 521 PRINTS P450 superfamily signature 372 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g3254 521 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g3254 521 PRINTS P450 superfamily signature 459 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g3254 521 PRINTS E-class P450 group I signature 71 90 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g3254 521 PRINTS E-class P450 group I signature 95 116 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g3254 521 PRINTS E-class P450 group I signature 308 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g3254 521 PRINTS E-class P450 group I signature 328 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g3254 521 PRINTS E-class P450 group I signature 371 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g3254 521 PRINTS E-class P450 group I signature 411 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g3254 521 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g3254 521 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3254 Tpr-Chr6 35139207 35142325 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3254 1 519 Cytochrome P450 AT5G06900 45.681 1.36e-157 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3254 K24188 - gmx:100805931 654.44