Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3253 ATGCGTATTAAATCAACAAATCCTCTAGTTGTTGGTGGTGTAATTGGAGATGTTTTGGATCCATTTACAAATTCAGTTTCTCTAAGGGTTGTTTATGAAAATAAGAAAGAAGTGATCAACAGTGGTGAGCTCAAACCCTCCCAAATAGTGAATCCACCAAGAGTTCAAGTTGGTGGAAATGATTTCAGGACTCTATACACTCTGGTGATGTTGAACCCTGATGCACCAACCCCAAGTGATCCTAATATGAGGGAATACCTGTATTGGATGGTAACCAATATTCCAGCGACAACAGGGACATCTTTTGGGCAAGAGATAGTGAGCTATGAAAGTCCAAAGCCAACATCAGGGATTCATCGTGTGATATTTGTGTTATTTAAGCAACCTTGTAGGCACACAATATTAGCTCCTGGATGGAGACAAAATTTCATTGCAAGAGATTTTGCAGAAGTTTATAATCTTGGATTACCTGTTGCTGCTCTCTACTTCAATTGTCAAAAAGAAAATGGTTCTGGTGGAAGGAGGTTGATCATCTAA 537 0.3911 MRIKSTNPLVVGGVIGDVLDPFTNSVSLRVVYENKKEVINSGELKPSQIVNPPRVQVGGNDFRTLYTLVMLNPDAPTPSDPNMREYLYWMVTNIPATTGTSFGQEIVSYESPKPTSGIHRVIFVLFKQPCRHTILAPGWRQNFIARDFAEVYNLGLPVAALYFNCQKENGSGGRRLII* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3253 178 PANTHER FTB2 5 176 - -
Tpr6g3253 178 CDD PEBP_euk 26 165 IPR035810 -
Tpr6g3253 178 SUPERFAMILY PEBP-like 7 172 IPR036610 -
Tpr6g3253 178 PANTHER PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN 5 176 IPR035810 -
Tpr6g3253 178 Pfam Phosphatidylethanolamine-binding protein 53 161 IPR008914 -
Tpr6g3253 178 Gene3D - 2 172 IPR036610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3253 Tpr-Chr6 35132894 35136071 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3253 K16223 - gmx:100808334 289.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3253 6 35132894 35136071 Tpr2g0602 2 6720995 6725260 PCT