Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3237 ATGGCTAACACATCCTCAACATTAGCGGAAAAAAAGAAGGTTTTGTTCATAATGGGTGCAACTGGAACTGGAAAAACTAAACTTTCCATCAATTTAGGTACTCAATTCCTCTCTCAAATCATCAACTCTGACAAAATTCAAGTCTACAAGGGTCTTGACATTGTCACTAACAAGGTACCAGAATCCGAACGTTGTTCGATTCCACATCACATGTTAGGCATTGTCGATGATCCTGATTATGACTTCACTGTGAATGATTTTTGCAAGCATGTGCTTGAAGCTCTAGATCTCATAATTGAAAATGGGCACCTACCTATTATTGTAGGAGGGTCAAATTCTTACCTACAAAAATTGGTTGATAGTGCATTTTGTTCAAAATATGATTGTTGTTTCATTTGGACCGATGTGTCTTTGCCTATTTTGTTTCAATATTTAGACAAAAGAGTTGATGAAATGGTTGAGGAAGGGTTGGTGGATGAGATTAGAGAATTTTTTGTGCCTGGAGCAAATTGTGAAGTGGGGATTAGAAGGGCTATTGGGGTTCCTGAGCTCAATTATTATTTTGAGATAGAAAATAAAAAAGATATTGATAAGGCTCAGAAGGAAAATATACTACAAGAAGGGATTAAAAATATCAAACAAAACACTTGGAAATTGGCTGAAAATCAACTCTCCAAGATCCATAATATGGTTAATAATCTTGGATGGAAGATGAACAAAATTGATTCTACAAAAGTGTTTGATGCTCTTTTAAAGGGAGAAGAAGATTACAAACATTTGCATCAAGAGATTGTGGTTAAGCCATGCATTGAGATTGTCAAGACATTTCTAGAGGAGACAACTCAAGCATTTGGAAATACAAATATAAAATATTCAAATGGTGTTTGA 888 0.3491 MANTSSTLAEKKKVLFIMGATGTGKTKLSINLGTQFLSQIINSDKIQVYKGLDIVTNKVPESERCSIPHHMLGIVDDPDYDFTVNDFCKHVLEALDLIIENGHLPIIVGGSNSYLQKLVDSAFCSKYDCCFIWTDVSLPILFQYLDKRVDEMVEEGLVDEIREFFVPGANCEVGIRRAIGVPELNYYFEIENKKDIDKAQKENILQEGIKNIKQNTWKLAENQLSKIHNMVNNLGWKMNKIDSTKVFDALLKGEEDYKHLHQEIVVKPCIEIVKTFLEETTQAFGNTNIKYSNGV* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3237 295 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 1 290 IPR039657 -
Tpr6g3237 295 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 138 238 - -
Tpr6g3237 295 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 1 290 - -
Tpr6g3237 295 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 200 IPR027417 -
Tpr6g3237 295 Gene3D - 11 277 IPR027417 -
Tpr6g3237 295 Pfam IPP transferase 47 121 - -
Tpr6g3237 295 Pfam IPP transferase 126 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3237 Tpr-Chr6 34973651 34974538 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3237 95 283 C2H2 Transcription Factor Family AT2G27760 30.876 4.70e-20 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3237 K10760 - gmx:121173984 408.297