Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3236 ATGTTTGATACTATGATAGGGCAGCTTGAAAATAGATCCCTAGGATATGATGATTGTCTGCTGATTATGGAAAGTGTCCTTGTAATTGCCGCCTACATGAAGAGAACAGATATTTGTTTACCTCTGTGGTACAAAATCTTAGTCGGTGGAATCAAACCGCAGTCTGATATATGTCAATTAATTGGATACCTTATCCCAAGAAAAACTCGCCGTCAGCTTTATGCGCTTATGACGGTATCTGGATACAGTCTGCTAGTTTCTTTTGGCCTATGGATGGGGCCTGCCGAACATGAAATAAGATGGAATTGGAGATTCCGTGATAACGTCCAATTTTGCAGAAGGCTGATTTTGGTATTTCATCATCGGGACAAAGACAAAGAAGCGTATAAGAGGGATCGTCGCATGTGGACAAATTTGAGACATGAGTATCAGAGAAGCCAAAGGATGAAGATGCTTTATGGTGCTAAATCTCCTACTGCACCGCTGGATGAAGCATATAAGATAGTGCAGATTATAAAAAAAATGGATCGTAAACTGTCGAAGCGTGATTTGGCTCATGATGATGATGATCCCGATGAAAGGGAAGATTTGGCTCCCAAAGTCCCCGCTCCTCTTGCATCTGAGGCCATTGCAAATTTGTCTGTGAATGCCAATGTGGCGAAGGCGGTTGCAGAAGAGGGTGGGGTTGAGATTCTCACTAGTTTGGCTAGGTCAATGAACAAACTGGTGGCTGAAGAAGCTGCTGGAGGATTATGGAATCTCTCTGTTGGAGAAGAGCACAAGGGAGTTATGCGAGATGGTGGTATACGCCTCCTTCTTGGCCTTGCAAAATCATACAGGGAAGGGCTTCAGTCTGAGGCAGCCAAGGCCATTGCAAATTTGTCTGTGAATGCCAATGTGGCGAAGGCGATTGCAGAAGAGGGTGGGATTGAGATTCTCACTAGTTTGGCTAGGTCAATGAACAAACTGGTGGCTGAAGAAGCTGCTGGAGGATTATGGAATCTCTCTGTTGGAGAAGAGCACAAGGGTGCCATTGCTGAAGCTGGTGGAGTATTAGCGTTAGTGGATCTTATATTCAAGTGGTCCTCTACTGGAGATGGAGTTTTAGAACGTGCAGCTGGTGCATTGGCTAATTTGGCTGCTGATGACAAGTGTAGTACAGAGGTTGCACTATGTTCAGGAGCCACAGGCCTCGATGATGAAAATGCTAGCACCGATTAA 1221 0.4488 MFDTMIGQLENRSLGYDDCLLIMESVLVIAAYMKRTDICLPLWYKILVGGIKPQSDICQLIGYLIPRKTRRQLYALMTVSGYSLLVSFGLWMGPAEHEIRWNWRFRDNVQFCRRLILVFHHRDKDKEAYKRDRRMWTNLRHEYQRSQRMKMLYGAKSPTAPLDEAYKIVQIIKKMDRKLSKRDLAHDDDDPDEREDLAPKVPAPLASEAIANLSVNANVAKAVAEEGGVEILTSLARSMNKLVAEEAAGGLWNLSVGEEHKGVMRDGGIRLLLGLAKSYREGLQSEAAKAIANLSVNANVAKAIAEEGGIEILTSLARSMNKLVAEEAAGGLWNLSVGEEHKGAIAEAGGVLALVDLIFKWSSTGDGVLERAAGALANLAADDKCSTEVALCSGATGLDDENASTD* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3236 406 SUPERFAMILY ARM repeat 206 385 IPR016024 -
Tpr6g3236 406 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 349 394 IPR000225 GO:0005515
Tpr6g3236 406 PANTHER PROTEIN ARABIDILLO 1 262 398 IPR044583 -
Tpr6g3236 406 PANTHER PROTEIN ARABIDILLO 1 206 263 IPR044583 -
Tpr6g3236 406 Gene3D - 157 397 IPR011989 -
Tpr6g3236 406 Pfam Armadillo/beta-catenin-like repeat 302 336 IPR000225 GO:0005515
Tpr6g3236 406 Pfam Armadillo/beta-catenin-like repeat 221 255 IPR000225 GO:0005515
Tpr6g3236 406 Pfam Armadillo/beta-catenin-like repeat 339 381 IPR000225 GO:0005515
Tpr6g3236 406 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 267 309 IPR000225 GO:0005515
Tpr6g3236 406 SMART arm_5 338 381 IPR000225 GO:0005515
Tpr6g3236 406 SMART arm_5 216 256 IPR000225 GO:0005515
Tpr6g3236 406 SMART arm_5 257 296 IPR000225 GO:0005515
Tpr6g3236 406 SMART arm_5 297 337 IPR000225 GO:0005515
Tpr6g3236 406 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 308 350 IPR000225 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3236 206 394 U-box Gene Family AT5G67340 30.928 6.43e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3236 - - gmx:100805530 243.817