Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3225 ATGTCAATTAAAAATTTATTATTAGTATTTATCGGTAGAGGTGAAAATCGAACTCAAGACCAATTTTATTCTCAAGCTCGAGAACATATGCCGCCAGCCAACAAAATAATAGATGTGTTTACTATTGGAGATATCGTTTTGGCGATTCTTCTTTTCGTGGCAATCCATTATTGGAGGCTCAATAGAAACACATCCATGACAAAGTGGCCTGTGCTTGGAATGCTACCTGCTTACATACATAATATATCCAACATTCACAACTATTTAACTTTAATCTTGAAACAAAATGGAGGAACATTCATTTTTGAAGGACCATGGTTAACAAATTTGGGCACTGTTTTCACCTGTGATCCTATGAACGTGCAACATATCACAAGCACAAAATTTGCAAATTATGGAAAAGGGAACCATTTCAGAGAGATTTTTGAAATTCTTGGAGAAGGAATTTTCAGGTCTGATTCCCACATATGGAAGTACAACAGAACACTACTTCATTCAATTTTCAAACAAGAAAGTTTTCGTGCATTTATTCAAAAAACAGTTGAGGAAAAAGTTTGTAATGGTCTTTTTATGTTTCTTGACAATGCTTGTAAAGAAGGTATTCAAGTGGATTTACAAGATGTTTTTCAAAGGTTAACTTTTGACAATATATGTTCTATAGTTTTAGGATATGATCCTAGTTGTCTTTCTATTGATCTCCCTATAATTAAATGTGAGAGAGCCTTTACACAATCAGAAAACACATTGTTCTATAGACATGTAAAGCCAAAGTTCTTGTGGAAGTTGCAAAATTGGTTTCAAGTTGGTCAAGAGAAAGAATTTGTAGAGAATAATAAAATTCTTGATGAAATGTTGTATTCACAAATCAAATCCAAAAGAGATACACAAGGACAAAAAAAATTTGACTTGCTAAATACTATTATGAATGTAGTAGGAGATGAAAAAAACCCAATTGATGATAAGTTTTTGATAGATGATAAGTTTTTGAGAGACACATCAATTAATCTACTTGCAGCTGGAAGAGACACTATTAGTTCTTGTCTTAGTTGGTTTTTTTGGTTGGTGGCAACACACCCTTTGGTTGAAGCTAAGATTCTTGAAGAGATCAAAGAAAATTTACCATCAAGAGAACATAATTGGAAAGATTTAGGGACAAAAGGACTTGGTAAGTTAATTTATCTACATGGAGCTTTATGTGAAGCCTTAAGGCTTTATCCACCAATTCCTTTTGAGCATAAATGTGCATTGGAATCTGATGTGCTTCCTAGTGGGCATAGGATTAAGTCCAATGCAACAGTAATGTATTCACTTTATGCGATCGGAAGGGTCGAGGAAATTTGGGGAAAAGATTGCTTGGAGTTTAAGCCAGAGAGATGGATTTCGCAGAAAGGAGGGATAATTCATGTACCGTCTTACAAGTTCATTGCTTTTAATGCTGGACCAAGGAGTTGTTTGGGAAAGGATATAAGCTTCATTGAAATGAAAATTGTTGCTGCAGCAATATTGTCAAATTATCACATTCAAGTAGTGAAAGATCATCCCATAATCCCAAGTATTTCTGTTGTCCTACACATGAAACATGGCTTGAAAGTTAATGTCAAAAAAAGAAGCATTTGA 1617 0.3408 MSIKNLLLVFIGRGENRTQDQFYSQAREHMPPANKIIDVFTIGDIVLAILLFVAIHYWRLNRNTSMTKWPVLGMLPAYIHNISNIHNYLTLILKQNGGTFIFEGPWLTNLGTVFTCDPMNVQHITSTKFANYGKGNHFREIFEILGEGIFRSDSHIWKYNRTLLHSIFKQESFRAFIQKTVEEKVCNGLFMFLDNACKEGIQVDLQDVFQRLTFDNICSIVLGYDPSCLSIDLPIIKCERAFTQSENTLFYRHVKPKFLWKLQNWFQVGQEKEFVENNKILDEMLYSQIKSKRDTQGQKKFDLLNTIMNVVGDEKNPIDDKFLIDDKFLRDTSINLLAAGRDTISSCLSWFFWLVATHPLVEAKILEEIKENLPSREHNWKDLGTKGLGKLIYLHGALCEALRLYPPIPFEHKCALESDVLPSGHRIKSNATVMYSLYAIGRVEEIWGKDCLEFKPERWISQKGGIIHVPSYKFIAFNAGPRSCLGKDISFIEMKIVAAAILSNYHIQVVKDHPIIPSISVVLHMKHGLKVNVKKRSI* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3225 538 PANTHER CYTOCHROME P450 38 536 - -
Tpr6g3225 538 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 477 486 IPR017972 GO:0005506|GO:0016705
Tpr6g3225 538 SUPERFAMILY Cytochrome P450 56 536 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g3225 538 PRINTS E-class P450 group I signature 328 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g3225 538 PRINTS E-class P450 group I signature 348 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g3225 538 PRINTS E-class P450 group I signature 474 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g3225 538 PRINTS E-class P450 group I signature 484 507 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g3225 538 Pfam Cytochrome P450 67 519 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g3225 538 PRINTS P450 superfamily signature 339 356 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g3225 538 PRINTS P450 superfamily signature 396 407 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g3225 538 PRINTS P450 superfamily signature 475 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g3225 538 PRINTS P450 superfamily signature 484 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr6g3225 538 PANTHER CYTOCHROME P450 FAMILY PROTEIN 38 536 - -
Tpr6g3225 538 Gene3D Cytochrome P450 50 538 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3225 Tpr-Chr6 34818241 34820849 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3225 39 537 Cytochrome P450 AT2G23180 43.470 1.17e-156 455
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3225 - - gmx:100785815 683.715