Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3208 ATGGCAATAGGTAACACTTCTTCTTCATCTTCTTCTTGTTGTTCTCGTTTCTGGTCATCGGCGCTCCGATCTAAGCGCTTAGTCTCTCCGGCGGAGAAAACAGCTCGCGACAATTCCGGCCGTGGTCTTTCCCGCCGACTAGGTGTCTTCGACCTTATTCTTCTCGGGATCGGAGCTTCCATCGGTGCTGGTATCTTTGTCGTCACCGGCACCGTCGCTCGTGACGCCGGACCTGGGGTAACAATAAGTTTTATAATTGCTGGAGCATCATGTGTTATAAATGCACTATGTTATGCGGAGCTAGCTTCTCGATTTCCGGCTGTAGTAGGAGGAGCGTACCTGTATACATATACGGCTTTTAATGAACTTACTGCTTTTCTTGTTTTTTCACAACTAATGCTTGACTATCATATTGGGGCAGCTAGCATAGCAAGAAGTTTAGCAAATTACATTGTTTCATTTCTAGGGATCTTCCCTGTGTTCAAAGATAACATTCCAGCATGGATTGGACACGGTCAAAACATTGGAGGCGTGTTGTCCATCAATATCTTAGCTCCGATTCTCCTAATGCTTCTCACTTTAGTTCTCTGTCTTGGTGTTAAAGAATCATCAGCTGTGAATTCTTTTATGACAGTGACCAAGGTAATCATTGTTATTATTGTCATTTGTGCTGGAGCTTTTGAGGTTGATGTTTCCAACTGGTCTCCCTTTGTTCCAAATGGTATGAGAAGCGTCTTCACGGGCGCTACTGTAGTCTTCTTTGCGTACGTTGGGTTTGATGCAGTTGCCAATTCTGCTGAAGAATCTAAGAAGCCACAGCGGGATTTGCCAATAGGCATAATTGGAAGTCTCTTGGTATGTATTGCATTGTACATTGGAGTATGCTTAGTCATTACTGGAATGGTTCCATACAATCTTCTAGGAGAAGATGCTCCTTTGGCTGATGCTTTTAAATCTAAGGGTCTAAAATTTGTTTCTGTTCTGATTAGTATTGGTGCTATTGCTGGACTTACAACAGCACTCCTTGTTGGTCTCTATGTTCAGTCTCGGCTATATCTTGGACTTGGCAGGGATGGTTTGCTACCCTCAATATTTGCTAAAGTACACCCCAAACGCCACACCCCTCTTTATTCTCAGATTTGGGTTGGCTGTGTTGCCAGTATTTTGGCTGGGTTGCTTAATGTGAAAATACTATCGCACATTCTTTCCGTTGGTACGCTGACTGGCTATTCAGTTGTCTCAGCATGCGTTGTTGTACTTCGCTGGAAGGATAGGACAAATAGCCAAGTATCATCGGCTAAGCGGCTGGAGGGTATAATTTTCCTCATTACTGTTGCTCTTTCTGGATTTGCTGCGGGACTCCTTTTCCATTATCAAGTTTCATTTATCTTTGTGATTGCGGCTATAGTTGTTGCAATTGGTGCTTCTCTTGCTCTTCATTTCCGCCAGGTTTATGGAGATTCAGTAGGGTTTTCTTGCCCAGGAGTTCCTATTGTGCCGAGCATTTGCATTTTCTTCAACATGTTCTTATTTGGCCAGTTACATCGTGAAGCATGGTTTAGATTTGTGATTCTAAGCATTGTTATGGTTGGTGTTTATGCAACATATGGCCAGTATCATGCCGATCCTAGTGCTGATGAGAATATTATTTATCATGAGGCTCCGGTGGAATCACCTAGATGA 1683 0.4332 MAIGNTSSSSSSCCSRFWSSALRSKRLVSPAEKTARDNSGRGLSRRLGVFDLILLGIGASIGAGIFVVTGTVARDAGPGVTISFIIAGASCVINALCYAELASRFPAVVGGAYLYTYTAFNELTAFLVFSQLMLDYHIGAASIARSLANYIVSFLGIFPVFKDNIPAWIGHGQNIGGVLSINILAPILLMLLTLVLCLGVKESSAVNSFMTVTKVIIVIIVICAGAFEVDVSNWSPFVPNGMRSVFTGATVVFFAYVGFDAVANSAEESKKPQRDLPIGIIGSLLVCIALYIGVCLVITGMVPYNLLGEDAPLADAFKSKGLKFVSVLISIGAIAGLTTALLVGLYVQSRLYLGLGRDGLLPSIFAKVHPKRHTPLYSQIWVGCVASILAGLLNVKILSHILSVGTLTGYSVVSACVVVLRWKDRTNSQVSSAKRLEGIIFLITVALSGFAAGLLFHYQVSFIFVIAAIVVAIGASLALHFRQVYGDSVGFSCPGVPIVPSICIFFNMFLFGQLHREAWFRFVILSIVMVGVYATYGQYHADPSADENIIYHEAPVESPR* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3208 560 Pfam Amino acid permease 47 464 IPR002293 GO:0016020|GO:0022857|GO:0055085
Tpr6g3208 560 Gene3D Amino acid/polyamine transporter I 43 483 - -
Tpr6g3208 560 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 9 555 - -
Tpr6g3208 560 PIRSF AA_transporter 30 489 - -
Tpr6g3208 560 PIRSF AA_transporter 454 557 - -
Tpr6g3208 560 Pfam C-terminus of AA_permease 491 540 IPR029485 -
Tpr6g3208 560 PANTHER CATIONIC AMINO ACID TRANSPORTER 9-RELATED 9 555 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3208 Tpr-Chr6 34635829 34641413 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3208 5 484 Organic Solute Cotransporters AT1G05940 71.340 0.0 654
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3208 K03294 - gmx:100804988 848.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g0431 2 5024260 5027011 Tpr6g3208 6 34635829 34641413 PCT