Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr6g3187 | ATGTCAAAAATGTCTAGTCCAAGTAGTTCAGAGATAGAAGAGAAGAGAGTTACTTCAATTTTCAATGAAGCTGATTTATCTACTCAACAAGAAGAGGTTACAAAGGAAGACAAACTAATAGATGCAAAATCCAAAATGGGTGAGGTGAAAGAAGAAAACGAAAGATTGAAGATGATGCTATCGCGAGTTGAAAAAGACTACAACTCACTTCAACTCCGTTTCTTTGACATTGTTAACAAAGAGGTTTCTAACAAAGGAGTAGAAGATTCATCAACTCCACATGACGAAATCGATGAAGAACCTGAGCTTGTATCACTGTGCCTCGGAAGAAGTCCAAATGAGCATAAGAAAGAAGCAAAAATTGATCAAAATTCAAATAAGCCTAAAGAAAAAGAAGACATGGAAGTTAACCTTAGTCTTGGATTAGATTCCAAATATATGTTGTCTATGGAGTTAGTATCTGATTTGAGTCCAATGAATAGCTCAGAAGAATTACCAAAGGAAGTTGAAGTTGAAGAAAAAGGAACATTATTGTCATCATCAACAAATAAATCAACAAAAGTGATTAATGTGGATGATGATATTTCAGATCAAATGCCAGCTAAGAGAGTTAGAGTATCTGTGAGGGCTAAATGTGACACTCCCACGATGAATGATGGATGTCAATGGAGGAAATATGGACAGAAGATAGCAAAAGGAAATCCATGTCCAAGAGCATACTATCGTTGCACAGTTGCACCAGCATGCCCAGTTAGGAAACAGGTACAAAGATGTGCTGATGATTTGTCCATATTAATCACAACATATGAAGGAACACATAACCATCCTCTTCAAGTTACAGCATCAGCCATGGCATACACAACTTCAGCTGCAGCTTCAATGATGTTATCAGGTTCATCAACATCATCATCATCATCACATCAAAACATTCAACATCAAAATATTCATCATCAAAATTCCACATCTTTTGGAAATTCTTCAACACTACTCAATGGCCTAAATTTCAACAATAACTACTTTGAACAATCAAGAACACCAAAACAACAATTCTTCATTCCACAAAACCATAATAATTTGTTCCCAACAATCACTCTTGACCTAACTTCTCCTTCATCAATATCATCATCATCATCCAACATAGCTTCAATTCCAAGATTTCCTCCAAATAATCTCAATTTTTGTTCTACACAACCACCAAATTTCACACCAACATCAACCATTTGGAACAACAACAAATTAGGGTTAGGGTTCATTAACAATAACACATTACCTATTGAAAAACCACAAATTAGGCCTTTTAACCATTTCCAAGAAAATTTCTATCAAAATCAAAATTGTGTGACAAATTATCAAACACCTTCAAGGCAAGCATTGGCGGAAACAATTAGCAAAGCAATAAGCACTGATCCAAGTCTTCATTCAGTTATAGCTGCCGCAGTTACATCGATTGTAGGACAAGGATCAAACAATGGTGGAAATCAAGAAGAGTTAAGAGATAACGGTTTAGGTTCAGGATTGAATTTGAAACTTGGTGAGTATCCTCAAATGGTTTCAAACAATTTGTTGAATCAAAATGGGAAAGGATGTTTGAAGGGTTCATACTTCAAAAGGTTGTCACCAACAACAAGTTCACAAGCCAAAAACTTCATGCTTCTTCAACCATCATTGCCAAATTCTCTTTCTAAGAGTAACACAACTAGACCTCCATCCATTGTTAATCATATCAATCATTGTGATCCAAAAATGAACACACATCATTAG | 1761 | 0.3543 | MSKMSSPSSSEIEEKRVTSIFNEADLSTQQEEVTKEDKLIDAKSKMGEVKEENERLKMMLSRVEKDYNSLQLRFFDIVNKEVSNKGVEDSSTPHDEIDEEPELVSLCLGRSPNEHKKEAKIDQNSNKPKEKEDMEVNLSLGLDSKYMLSMELVSDLSPMNSSEELPKEVEVEEKGTLLSSSTNKSTKVINVDDDISDQMPAKRVRVSVRAKCDTPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPACPVRKQVQRCADDLSILITTYEGTHNHPLQVTASAMAYTTSAAASMMLSGSSTSSSSSHQNIQHQNIHHQNSTSFGNSSTLLNGLNFNNNYFEQSRTPKQQFFIPQNHNNLFPTITLDLTSPSSISSSSSNIASIPRFPPNNLNFCSTQPPNFTPTSTIWNNNKLGLGFINNNTLPIEKPQIRPFNHFQENFYQNQNCVTNYQTPSRQALAETISKAISTDPSLHSVIAAAVTSIVGQGSNNGGNQEELRDNGLGSGLNLKLGEYPQMVSNNLLNQNGKGCLKGSYFKRLSPTTSSQAKNFMLLQPSLPNSLSKSNTTRPPSIVNHINHCDPKMNTHH* | 587 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr6g3187 | 586 | SMART | WRKY_cls | 217 | 277 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Tpr6g3187 | 586 | PANTHER | WRKY TRANSCRIPTION FACTOR 72-RELATED | 38 | 569 | - | - | |
Tpr6g3187 | 586 | Coils | Coil | 39 | 73 | - | - | |
Tpr6g3187 | 586 | Pfam | WRKY DNA -binding domain | 218 | 276 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Tpr6g3187 | 586 | ProSiteProfiles | WRKY domain profile. | 212 | 278 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Tpr6g3187 | 586 | MobiDBLite | consensus disorder prediction | 1 | 28 | - | - | |
Tpr6g3187 | 586 | MobiDBLite | consensus disorder prediction | 110 | 133 | - | - | |
Tpr6g3187 | 586 | SUPERFAMILY | WRKY DNA-binding domain | 211 | 277 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Tpr6g3187 | 586 | PANTHER | WRKY TRANSCRIPTION FACTOR 36-RELATED | 38 | 569 | IPR044810 | GO:0003700 | |
Tpr6g3187 | 586 | MobiDBLite | consensus disorder prediction | 157 | 180 | - | - | |
Tpr6g3187 | 586 | Gene3D | WRKY domain | 202 | 277 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Tpr6g3187 | 586 | MobiDBLite | consensus disorder prediction | 111 | 133 | - | - | |
Tpr6g3187 | 586 | MobiDBLite | consensus disorder prediction | 1 | 39 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr6g3187 | Tpr-Chr6 | 34418980 | 34423086 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr6g3187 | 46 | 485 | WRKY Transcription Factor Family | AT5G15130 | 44.093 | 4.32e-84 | 270 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Tpr6g3187 | WRKY | 5.5e-24 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr6g3187 | - | - | mtr:MTR_7g009730 | 833.172 |