Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr6g3186 | ATGGGTTATCTTAGAAAAGTTTCCAAAACCTTAAAACAATCAAATTATGTTTCATTATTGTTCAATTACAATTTCACTCCATTATCAAACAGAATAACCCATCAAAGATTTTCCTTAAAACGTGCACTTTTCTGTACCCAATCACGTCAAAATAGTACCAAAGAGAAACCCATTATAGATTTGAGTCAGTACCCACCAGAGCTTGTGAGAAATTTCTCAATCATTGCACATGTTGATCATGGAAAATCTACTCTTGCTGATAGGCTTCTTGAACTCACTGGAACTATTAAGAAAGGAATTGGCCAACCTCAGTATCTTGATAAATTGCAGGTGGAGAGAGAAAGGGGAATCACGGTTAAAGCTCAGACAGCAACAATGTTTTATAAGAACATCATAAATGGTGATGATTCTCGTGATGGAAAGGAGTCACCTAATTATTTGTTGAATCTTATCGACACACCTGGGCATGTAGATTTCAGTTATGAAGTGTCAAGGTCACTAGCTGCTTGTCAGGGTGTGCTTTTGGTTGTTGATGCTGCTCAAGGAGTTCAAGCACAAACCGTTGCTAACTTTTACCTTGCCTTCGAATCTAACTTATCGATTATACCTGTCATTAACAAGATAGATCAGCCAACTGCTGATCCTGACCGTGTTAAAGCTCAATTGAAATCAATGTTTGATCTTGACACGAGTGATGTATTGCTAACATCGGCGAAAACTGGGAAGGGTCTTGAACATGTTCTTCCAGCAGTCATAGAGAGGATACCTCCGCCTCCTGGGAAGAGCGACTCTTCTTTACGTATGCTTTTACTTGATTCATATTTTGATGAATACAGAGGGGTGATATGCCATGTTGCTGTTGTTGATGGTGCCCTGCGCAAGGGGGATAAGATTTCTTCGGCGGCTACTGGCAAGTCATATGAAGCTTTGGATATAGGCATCATGCATCCTGAACTTACGCCTACTGGAATCTTGTTTACTGGACAAGTTGGTTATGTTATAAGTGGCATGCGGTCAACCAAAGAGGCACGCATTGGAGATACAATTTACCATGCACGAAGCACTGTGGATGTGGTACCTCTTCCAGGCTTCAAACCCGCAAAACATATGGTTTTTTCCGGTCTTTTTCCAGCTGATGGATCTGATTTTGAAGCACTCAACCATGCAATAGAGAAGCTTACATGCAATGATGCCAGTGTCTCTGTCGCTAAAGAAACTAGCACTGCTCTAGGTCTAGGGTTCAGGTGTGGATTTTTAGGCCTTCTTCACATGGATGTTTTTCATCAAAGGCTTGAACAGGAATATGGAGCTCATATTATCTCAACCGTTCCTACCGTGCCTTATATATATGAGTATTCTGATGGAAGCAAATTAGAAGTTCAGAATCCTGCTGCATTACCGTCTAATCCCAAGCAACGAGTGGTAGCCTGTTGGGAACCCACAGTAATAGCTACTATAGTTATGCCTAGTGAGTATGTTGGACCTGTTATCACCCTTCTCTCTGAGCGTAGGGGTGAACAGTTGGAGTACTCGTTCATTGACAGTCAACGAGTTTTCATGAAGTATCGTCTTCCTTTGAGGGAAGTTGTTATTGACTTTTATAATGAATTGAAGAGTATAACGTCAGGCTATGCATCATTTGATTATGAGGATTCAGATTATCAACAATCTGATCTGGTGAAACTTGATATTCTCTTGAATGGACAACCAGTTGATGCCATGTCAACCATTGTTCATAACTCGAAATCATATCGTGTTGGGCGTGAATTGGTGGACAAATTGAAGAAAGTCATAGACAGGCAAATGTTCGAGATATCCATACAAGCCGCTATTGGGTCAAAAATTATAGCAAGGGAGACTATTACGGCTATGAGAAAGAATGTTCTTGCCAAGTGTTATGGTGGTGATGTTTCACGAAAGAGGAAGCTATTGGAAAAGCAAAAGGAAGGGAAAAAGCGAATGAAACGTGTTGGTTCTGTTGATGTACCACAAGAAGCATTCCATGAACTATTGAAGGTTTCATAG | 2025 | 0.4059 | MGYLRKVSKTLKQSNYVSLLFNYNFTPLSNRITHQRFSLKRALFCTQSRQNSTKEKPIIDLSQYPPELVRNFSIIAHVDHGKSTLADRLLELTGTIKKGIGQPQYLDKLQVERERGITVKAQTATMFYKNIINGDDSRDGKESPNYLLNLIDTPGHVDFSYEVSRSLAACQGVLLVVDAAQGVQAQTVANFYLAFESNLSIIPVINKIDQPTADPDRVKAQLKSMFDLDTSDVLLTSAKTGKGLEHVLPAVIERIPPPPGKSDSSLRMLLLDSYFDEYRGVICHVAVVDGALRKGDKISSAATGKSYEALDIGIMHPELTPTGILFTGQVGYVISGMRSTKEARIGDTIYHARSTVDVVPLPGFKPAKHMVFSGLFPADGSDFEALNHAIEKLTCNDASVSVAKETSTALGLGFRCGFLGLLHMDVFHQRLEQEYGAHIISTVPTVPYIYEYSDGSKLEVQNPAALPSNPKQRVVACWEPTVIATIVMPSEYVGPVITLLSERRGEQLEYSFIDSQRVFMKYRLPLREVVIDFYNELKSITSGYASFDYEDSDYQQSDLVKLDILLNGQPVDAMSTIVHNSKSYRVGRELVDKLKKVIDRQMFEISIQAAIGSKIIARETITAMRKNVLAKCYGGDVSRKRKLLEKQKEGKKRMKRVGSVDVPQEAFHELLKVS* | 675 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr6g3186 | 674 | TIGRFAM | small_GTP: small GTP-binding protein domain | 73 | 247 | IPR005225 | GO:0005525 | |
Tpr6g3186 | 674 | Pfam | Elongation factor Tu GTP binding domain | 69 | 256 | IPR000795 | GO:0003924|GO:0005525 | |
Tpr6g3186 | 674 | PRINTS | GTP-binding elongation factor signature | 71 | 84 | IPR000795 | GO:0003924|GO:0005525 | |
Tpr6g3186 | 674 | PRINTS | GTP-binding elongation factor signature | 114 | 122 | IPR000795 | GO:0003924|GO:0005525 | |
Tpr6g3186 | 674 | PRINTS | GTP-binding elongation factor signature | 149 | 159 | IPR000795 | GO:0003924|GO:0005525 | |
Tpr6g3186 | 674 | PRINTS | GTP-binding elongation factor signature | 201 | 210 | IPR000795 | GO:0003924|GO:0005525 | |
Tpr6g3186 | 674 | SUPERFAMILY | Translation proteins | 257 | 354 | IPR009000 | - | |
Tpr6g3186 | 674 | TIGRFAM | lepA: elongation factor 4 | 69 | 673 | IPR006297 | GO:0005525 | |
Tpr6g3186 | 674 | Gene3D | - | 444 | 557 | - | - | |
Tpr6g3186 | 674 | SUPERFAMILY | EF-G C-terminal domain-like | 478 | 572 | IPR035647 | - | |
Tpr6g3186 | 674 | PANTHER | TRANSLATION FACTOR GUF1, MITOCHONDRIAL | 55 | 672 | - | - | |
Tpr6g3186 | 674 | Gene3D | - | 67 | 260 | IPR027417 | - | |
Tpr6g3186 | 674 | CDD | EF4_III | 369 | 444 | - | - | |
Tpr6g3186 | 674 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 66 | 280 | IPR027417 | - | |
Tpr6g3186 | 674 | CDD | LepA | 70 | 258 | - | - | |
Tpr6g3186 | 674 | CDD | lepA_C | 479 | 558 | IPR035654 | - | |
Tpr6g3186 | 674 | CDD | EF4_II | 266 | 351 | - | - | |
Tpr6g3186 | 674 | PANTHER | TRANSLATION FACTOR GUF1-RELATED | 55 | 672 | IPR006297 | GO:0005525 | |
Tpr6g3186 | 674 | ProSitePatterns | Translational (tr)-type guanine nucleotide-binding (G) domain signature. | 107 | 122 | IPR031157 | - | |
Tpr6g3186 | 674 | Gene3D | Elongation Factor G (Translational Gtpase), domain 3 | 362 | 443 | - | - | |
Tpr6g3186 | 674 | ProSiteProfiles | Translational (tr)-type guanine nucleotide-binding (G) domain profile. | 67 | 259 | IPR000795 | GO:0003924|GO:0005525 | |
Tpr6g3186 | 674 | Hamap | Elongation factor 4 [lepA]. | 65 | 674 | IPR006297 | GO:0005525 | |
Tpr6g3186 | 674 | Gene3D | - | 558 | 632 | IPR038363 | - | |
Tpr6g3186 | 674 | SUPERFAMILY | EF-G C-terminal domain-like | 370 | 447 | IPR035647 | - | |
Tpr6g3186 | 674 | Gene3D | Translation factors | 261 | 358 | - | - | |
Tpr6g3186 | 674 | Pfam | Elongation factor G C-terminus | 479 | 564 | IPR000640 | - | |
Tpr6g3186 | 674 | Pfam | GTP-binding protein LepA C-terminus | 566 | 672 | IPR013842 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr6g3186 | Tpr-Chr6 | 34411411 | 34418068 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr6g3186 | 69 | 210 | Eukaryotic Initiation Factors Gene Family | AT1G56070 | 41.497 | 6.94e-25 | 108 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr6g3186 | K21594 | - | gmx:100781092 | 1179.85 |