Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3181 ATGAACTTTACAAAATATTTAGTTTTGAATTTGTATGGTCCAAAAATGTGGATAGTCTTTCTTCTTATTTGGGGATTGATTATTGGGACTGAATCTTCTACATTGACATCTCAACCTGAAATGGAAGCAAATGCTATTTACAATAGTGGATGGTGGAACACTTCTCATGGATACTACAACATCTCGAATCGGTGTAATTGGGGTCAGATATCTTGCAACAAGGCTGGAAGCATCATACAAATCAACATAGACCGTTTTTATTCAGGTTGGGGAATAAGTTTTGGAACACTCAACTTGTCTACTTTCCACAATTTAGAAACCCTTGTTATCACGAATGCTAGACTACAAGGGACTATCCCAAAAGAAATCGGTCTTCTCTCCAAACTCACTTTTCTTGATCTGTCTAAAAATTCCCTTGTAGGTGAGATACCTCCTTCACTAGGAAACCTTACACAATTAAAGCACTTAGATATATCTTACAACCTATTTAATGGGAGTTTTCCTATTACTATCACAGGAATTGGACTAATAATTCATCTTGATTTGTCTAGTAATTCTTTTAAAGGTGAGGTACCTCATTTAATAAAAAATCTTAGACAATTAGAGTACCTAGACATATCTTACAATTACATTGATGGTTCTATTCCTTTTGATGAGTTGGGGTTTCTGAAAAATCTCACTAAATTAAGTCTATCCAACAATAGGCTCAAAGGTGAGATACCTTCTTCACTAGGAAATCTCAAAAAATTAGAGGACCTAGACATCTCCTTCAACAAAATTGAAGGTTCTATTCCTCTTGAGTTGGGATTCTTGAGAAAACTCACTACATTAGATCTATCATTCAATAGACTCAACGGAAACTTGCCTATTTCCATTACAAATCTCACACAATTAAAATTCATTTATATCTCTCACAATTATCTCAGAGGTTCCCTCCCATCTAACTTGGGTCAATTAAGCAACTTGCAAATCCTGTATTTAAATAACAACTCCTTCAGTGGGACCTTTCCTATTTCTTTGAATAATCTCACACAATTAAAATACCTTAACACAATTGACCTCAGTCACAATAACATTAGTGGTGAAATTCCTTCTACGCTAGGAGGCTTTCGACATCTTCTTTTAAACAATAATAATCTCACTGGAACAATTCCCCAATCTATTTGTAATATCACTGATGTTGACATTTCCTATAATTATTTGAGGGGTCCCATTCCATTTTGTGTTAAGCCTTATGCAGTAATAGGGAACAAGGATGTATGCACTAACTCTTATTACAATCGAATCTACTTTCATTTTCATGCTTGCTCGCCTGGTAATAAAGTAAATCACCATGTTGCCATTTTTCTTCCTATCCTTATTGTTCTAATCCTAGCCTTCTCAAGTCTCGTGTGCTTTAAACTTTGTAATAATTCTATCAAGAAAAACAATGGAAACACAATGACAACAAAGAATGGAGATGTTTTTTGTATATGGAATTATGATGGCAAAATAGCACATGATGACATCATTAGAGCAACAGAAGACTTTGACATGAGATATTGCATTGGTACAGGAGCATATGGAAGTGTTTACAAGGCGCAATTACCGTGCGGAAAAGTTGTTGCCTTAAAAAAACTTCACGGTTATGAAGCAGAAGTGCCAGCTTTTGATGAAAGTTTTAGAAATGAAGTGAAAATATTATCAGAAATAAGGCACCGACATATTGTGAAGCTTTATGGATTCTGCTTGCACAAAAGAATCATGTTTTTGATCTACCAATACATGGAGAAAGGAAGCTTGTTCTCTGTCTTGTATGATGACGTAGAGGCCGTGGAATTCAATTGGAGAAAAAGGGTTAACATTGTTAAAGGAGTAGCATCTGCTCTTTCATATCTTCATCATGATTGCACGACTCCAATAGTGCATCGAGATGTATCTAGTGGAAATATCTTGCTAAACTCCGAGTGGCAGCCTAGTGTGTCTGACTTTGGCACAGCTCGACTCCTTCAACATGATTCATCCAATCGAACAATAGTTGCTGGAACAATCGGATATATAGCTCCTGAGCTTGCATATACCATGGTTGTGAGCGAAAAGTGTGATGTATATAGTTTTGGAGTAGTAGCACTAGAAACTTTAATGGGAAGACACCCTCAGGAACTATTGTCGTCACTTCAATTAGCATCAACTCAAAACATGAAATTATGTGAAGTATTAGACCAACGTCTCCCATTTCCAAATAATGCGATGGTGTTACTTGACATAATTCGTGTAGCTGTAATAGCATTTGCATGCTTAAATTTCAATCCTAGCTCTCGACCAACGATGAAACGTGTGTCACAGAGCTTTGCCACTGAGCTTACACCATTAACCATTCCTTTGAGTGAAATTTCAATGCAGCAACTAATGAGTCAAGAATTCAAAGCATTATTTCATATTCTCAACCATTGA 2433 0.3609 MNFTKYLVLNLYGPKMWIVFLLIWGLIIGTESSTLTSQPEMEANAIYNSGWWNTSHGYYNISNRCNWGQISCNKAGSIIQINIDRFYSGWGISFGTLNLSTFHNLETLVITNARLQGTIPKEIGLLSKLTFLDLSKNSLVGEIPPSLGNLTQLKHLDISYNLFNGSFPITITGIGLIIHLDLSSNSFKGEVPHLIKNLRQLEYLDISYNYIDGSIPFDELGFLKNLTKLSLSNNRLKGEIPSSLGNLKKLEDLDISFNKIEGSIPLELGFLRKLTTLDLSFNRLNGNLPISITNLTQLKFIYISHNYLRGSLPSNLGQLSNLQILYLNNNSFSGTFPISLNNLTQLKYLNTIDLSHNNISGEIPSTLGGFRHLLLNNNNLTGTIPQSICNITDVDISYNYLRGPIPFCVKPYAVIGNKDVCTNSYYNRIYFHFHACSPGNKVNHHVAIFLPILIVLILAFSSLVCFKLCNNSIKKNNGNTMTTKNGDVFCIWNYDGKIAHDDIIRATEDFDMRYCIGTGAYGSVYKAQLPCGKVVALKKLHGYEAEVPAFDESFRNEVKILSEIRHRHIVKLYGFCLHKRIMFLIYQYMEKGSLFSVLYDDVEAVEFNWRKRVNIVKGVASALSYLHHDCTTPIVHRDVSSGNILLNSEWQPSVSDFGTARLLQHDSSNRTIVAGTIGYIAPELAYTMVVSEKCDVYSFGVVALETLMGRHPQELLSSLQLASTQNMKLCEVLDQRLPFPNNAMVLLDIIRVAVIAFACLNFNPSSRPTMKRVSQSFATELTPLTIPLSEISMQQLMSQEFKALFHILNH* 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3181 810 SUPERFAMILY RNI-like 99 403 - -
Tpr6g3181 810 Gene3D Ribonuclease Inhibitor 36 176 IPR032675 -
Tpr6g3181 810 Gene3D Ribonuclease Inhibitor 177 428 IPR032675 -
Tpr6g3181 810 Pfam Protein kinase domain 516 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3181 810 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 35 803 - -
Tpr6g3181 810 SMART LRR_typ_2 223 247 IPR003591 -
Tpr6g3181 810 SMART LRR_typ_2 271 295 IPR003591 -
Tpr6g3181 810 SMART LRR_typ_2 346 370 IPR003591 -
Tpr6g3181 810 SMART LRR_typ_2 319 343 IPR003591 -
Tpr6g3181 810 SMART LRR_typ_2 126 150 IPR003591 -
Tpr6g3181 810 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 35 803 - -
Tpr6g3181 810 ProSiteProfiles Leucine-rich repeat profile. 225 248 IPR001611 GO:0005515
Tpr6g3181 810 SMART LRR_sd22_2 319 351 - -
Tpr6g3181 810 SMART LRR_sd22_2 247 268 - -
Tpr6g3181 810 SMART LRR_sd22_2 271 297 - -
Tpr6g3181 810 SMART LRR_sd22_2 126 152 - -
Tpr6g3181 810 SMART LRR_sd22_2 198 219 - -
Tpr6g3181 810 SMART LRR_sd22_2 223 246 - -
Tpr6g3181 810 ProSitePatterns Tyrosine protein kinases specific active-site signature. 634 646 IPR008266 GO:0004672|GO:0006468
Tpr6g3181 810 Gene3D Transferase(Phosphotransferase) domain 1 589 783 - -
Tpr6g3181 810 Pfam Leucine Rich Repeat 128 150 IPR001611 GO:0005515
Tpr6g3181 810 Pfam Leucine rich repeat 225 284 IPR001611 GO:0005515
Tpr6g3181 810 Pfam Leucine rich repeat 152 211 IPR001611 GO:0005515
Tpr6g3181 810 Pfam Leucine Rich repeat 347 362 IPR001611 GO:0005515
Tpr6g3181 810 Gene3D Phosphorylase Kinase; domain 1 471 588 - -
Tpr6g3181 810 ProSitePatterns Protein kinases ATP-binding region signature. 516 538 IPR017441 GO:0005524
Tpr6g3181 810 SUPERFAMILY Protein kinase-like (PK-like) 498 775 IPR011009 -
Tpr6g3181 810 ProSiteProfiles Protein kinase domain profile. 510 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3181 Tpr-Chr6 34372172 34375441 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3181 99 682 Receptor kinase-like Gene Family AT4G08850 38.694 7.03e-128 405
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Tpr6g3181 Pkinase 1.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3181 - - mtr:MTR_7g009970 1048.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3181 6 34372172 34375441 Tpr6g3181 6 34372172 34375441 ECH