Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3176 ATGATGGCAGATGTGATTGCGAGTATAATTGTGATTGTTGTGACCGTTGCAACTGCGGCAGCGGCTATATACTTTCAAGGATGGTTTATAATGTGGGGACAATATATTTTCCACAACGAAATGGTAGAGAAGATAAAAGCAATGGGAAGATTCATAGCCAAAAGCAAAGATATTCAACCATTTTCTCATCTTGATTCGCTACCAGGTATTCAGTATGAATTATCTGAAGACTTCGTTTATTTTAGATCAACAAAAAGGGCTTATGATGAACTCTTTGAGACACTCGAGGACGACTCCATCCATATGATAGGATTGTATGGTGAGGGTGGATGTGGAAAAACAACTCTTGTAACTGAAGTTGGCAAGAAGGCTGAGGATTTGGAAATGTTTGATAAGGTTATATCAATCACCGTGTCTCGAACTCCAAACATTAGAGACATTCAAGGAAAAATTGCAGATATGTTGAAATTGAAACTGGGTGAAGAAAGTGAAGAGGGAAGAGCCCAACGTTTATGGATGTGTTTAAAACAAAAGAAGCGAATTCTTATCATAGTAGACAGTTTATGGAGAGATTTCAAATTGAAGGATATCGGGATTCTCTTAGATGATGATATAAAAAAAACATGGAAGATCCTCATAACCACTCGTCATGAGCGTGTTTGTACATTAATGAACTGTCAAAAGAAGATTCATTTGGAGCTCTTGTCTGAAGATGAGTCCTGGAATTTATTCCAAAAGTTAGCAAGAATTGATGACGAACGCTCCAAGGTATTGCATAATGTGCCACGAAAAATATGCAATGAATGTATGGGACTTCCCATAGCAATCAAAATTGTGGGGTCATTATTCAAAGAGAGGAATGAAATTGAATGGCAGCAGGCGTTTCAGAAGTTACGGGATTCAAAGGCATATGATGATGAAGATAATGCTACTTTTTGCGTTAAATTAAGCTATGATTATTTGCCAACGAAAAAAGCACAACAAATCTTTCTGTTGTGTGCTCTTTTTCCAGAAGAATATCACATCCCTACAGAAGATTTGGTGAGGTATGCACTTGGACTAGGTGTGAGAGAAATATTATCGTTAAAGTCAATGAAGAGCTCCATCAGTGCAGTCATAACAGAACTTCTAGATTCTTGTTTGCTGACACGTGGTTCCGTGAAGATGCATAACATGGTTCGTGATGCAGCCTTATGGATTGCAAATAGATCAGATTGCAAAATCTTGGTAAACGTTGACAAACCACTTAGCACTGTGGCAGTAATAATACCAGATTATTTTGCAGTATCTTCATGGTGGTACAATGAAAATCCCTCTTTTTGTCAATTGCATGCTCCAAATCTTAAACTTCTATTGATAAATATTAGTGCTCATGATAGATCACTGAATTCCTTGGATTTATCACATTTAACATTCGAAGGAATACAAGGGCTTCAAGTTTTTTCTATAACCATCAATTACAAAATAGTACCAATATCATTTCCTCCATCAATCCAATTGTTGACAAATGTTAGAACTCTGCGCTTAAATGGATTGACATTTGGTGACATTTCTTTCATAACAAGCTTAACAAGACTAGAGGTTCTTGACTTGAGACGCTGTGAGTTCAACGAGCTTCCTATCGAAATAGGAAAGCTTAGAAACCTGAAGCTGCTAGATTTGTCAGAATGTCTTATTTTTGAAAACACCTATAATGGTGCAATAGGAAAATGTTCACAGCTAGAGGAGTTATATGCTTCAAAATGCTACCCATCATATGAGTATGTTAACGAGATCATTCTGGATATTGGTATTCTCCTAAATCTACAAAGATTTGTATTTGGTGATCAAATCATTCCAGAAAGCACTAGAGTTGTACAAGTAAATGATTTGAATATCTCAAAGTTGAGGACATCCAAAAGAAATATTCTGCAAATAGCTGAAACTATTTCTTTGAGTGGTCTACATGGAGGATGTAAAAGTATCGTCCCAGATATGGTTGGAATTGTGGGAGGCATGAATAATTTGTCTACTCTCCATCTTACACATTGTGAAGAGATAGAATGCATCTTTGATGCAACCTATGATTTCAAGGAAGATGATTTAATTCCCAGGTTGGTCGTGTTACGCCTTAAGAATATGTTTAACTTGACAGAACTGTGTCATGGTCCACCTCTGCAAGTATTACACTACTTTGAGAAGCTAGAACTACTTTATATAGATCGTTGCCAGCAGTTACACGTCATATTTCCATCGGAATGTAAATTGCAAAATCTTAAGATCCTCAGATTAACATATTGCATGACCGATGAAATACTCTTTTCAGAATCTGTTGCCCAAAGTATGCATCAACTAGAAGAACTAACAATAGCAGGCTGCAATGAACTGAAGCATATAATTGCTTTAAGTGGAAGCGATCATGGTGGTTGTAATACAAGTGAAGAAATAATTCCAACTCCAATGGACTCTCCCTTTTTGATGAGCAAACTAAGGGATATTCTTATTTTTAATTGTAAAAGTTTAGAATCGATATTTCCAATTTGTTATGTCGAAGGACTTGCACAATTGCAAAATATGAGTATAGAAAAGGCTCCTAAGCTGGAATATGTGTTTGGCGAATGTGATCATGAATACGTTTCATCACACCAAAACCATGTCATGCTGCCTCATTTGGAAGATCTAAACCTGGTTGATCTTGACAATCTCATTGGGATATGTCCAGAGAGTTGTCAAGCAAAGTGGCCATCTCAGTCTCTGAGGATACTACACATACAAGGATGTCCAAAATTGGCTATACCATGGTTCAATTTGAAGGATGGCTATGATCAGAGTGAACATCATCTGAATGAAATTTGGAGTCTCCAATGTCTTCAGAGTTTTACTTTGGATATTATTTGGTTATTGTGA 2886 0.3669 MMADVIASIIVIVVTVATAAAAIYFQGWFIMWGQYIFHNEMVEKIKAMGRFIAKSKDIQPFSHLDSLPGIQYELSEDFVYFRSTKRAYDELFETLEDDSIHMIGLYGEGGCGKTTLVTEVGKKAEDLEMFDKVISITVSRTPNIRDIQGKIADMLKLKLGEESEEGRAQRLWMCLKQKKRILIIVDSLWRDFKLKDIGILLDDDIKKTWKILITTRHERVCTLMNCQKKIHLELLSEDESWNLFQKLARIDDERSKVLHNVPRKICNECMGLPIAIKIVGSLFKERNEIEWQQAFQKLRDSKAYDDEDNATFCVKLSYDYLPTKKAQQIFLLCALFPEEYHIPTEDLVRYALGLGVREILSLKSMKSSISAVITELLDSCLLTRGSVKMHNMVRDAALWIANRSDCKILVNVDKPLSTVAVIIPDYFAVSSWWYNENPSFCQLHAPNLKLLLINISAHDRSLNSLDLSHLTFEGIQGLQVFSITINYKIVPISFPPSIQLLTNVRTLRLNGLTFGDISFITSLTRLEVLDLRRCEFNELPIEIGKLRNLKLLDLSECLIFENTYNGAIGKCSQLEELYASKCYPSYEYVNEIILDIGILLNLQRFVFGDQIIPESTRVVQVNDLNISKLRTSKRNILQIAETISLSGLHGGCKSIVPDMVGIVGGMNNLSTLHLTHCEEIECIFDATYDFKEDDLIPRLVVLRLKNMFNLTELCHGPPLQVLHYFEKLELLYIDRCQQLHVIFPSECKLQNLKILRLTYCMTDEILFSESVAQSMHQLEELTIAGCNELKHIIALSGSDHGGCNTSEEIIPTPMDSPFLMSKLRDILIFNCKSLESIFPICYVEGLAQLQNMSIEKAPKLEYVFGECDHEYVSSHQNHVMLPHLEDLNLVDLDNLIGICPESCQAKWPSQSLRILHIQGCPKLAIPWFNLKDGYDQSEHHLNEIWSLQCLQSFTLDIIWLL* 962
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3176 961 PANTHER - 71 924 - -
Tpr6g3176 961 SUPERFAMILY L domain-like 388 924 - -
Tpr6g3176 961 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 72 333 IPR027417 -
Tpr6g3176 961 Gene3D - 70 233 IPR027417 -
Tpr6g3176 961 Pfam NB-ARC domain 88 305 IPR002182 GO:0043531
Tpr6g3176 961 Gene3D - 318 398 IPR036388 -
Tpr6g3176 961 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 71 924 - -
Tpr6g3176 961 CDD AAA 86 234 - -
Tpr6g3176 961 Gene3D - 234 317 IPR042197 -
Tpr6g3176 961 PRINTS Disease resistance protein signature 102 117 - -
Tpr6g3176 961 PRINTS Disease resistance protein signature 175 189 - -
Tpr6g3176 961 PRINTS Disease resistance protein signature 269 283 - -
Tpr6g3176 961 PRINTS Disease resistance protein signature 544 560 - -
Tpr6g3176 961 Gene3D Ribonuclease Inhibitor 742 878 IPR032675 -
Tpr6g3176 961 Gene3D Ribonuclease Inhibitor 436 714 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3176 Tpr-Chr6 34332708 34336658 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3176 100 403 WRKY Transcription Factor Family AT5G45050 25.868 5.19e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3176 - - mtr:MTR_3g053200 1243.8