Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3144 ATGTTCATCCCCATACCCAGATTCCGGCGAGCAACCACCGTCGCCGGAAAGTCCAATCACTTCCATCTCTTTTTTCCCTCAACCGTTCTTAATATCTCCCTGCCCTCACCATCTCGTCCTTCACCACCGCATCCACCACAACCTCCACCGCCACCTACAAATCAATCTCCGAATCAGAACGTCCTATCCGCTTCCGGTGATGCCGCCGTCATCAGAATCACGTTATTCTTCCTCTCAGGTCTGAATTGTGCAGAGGCAGTCAATTTTGCTCCAGCTGACTGGCTACCACACGGTTCATTTGGAGCTGATCTCTATAAGCAGTTTCACAAAACAACTGTCTTGTCTCATGAGGAGCTTCTTTGTGTAGTAGCCCAGGGTTGGAGAAGTGAGATGGAGAGGAACTGGATTGGTTGTCCAACAATGATACTTAGTTCTAAGGATCCGAGACTGTATCTTCACTTGGCGCCGGAATTTGCTCACTACAAGGGAAATCACACTTATGTGCATGCGACAAGAAAAGGATATTGGCAGTTTGATATGGGAGATGTAATTATTGATGGTAAATCCACCGGATATATTGTGTTGATGGCTGTGCGGCCATTGCTGACTCGGGGACTTATTTGTTGGCGGTTCGAATGA 639 0.4773 MFIPIPRFRRATTVAGKSNHFHLFFPSTVLNISLPSPSRPSPPHPPQPPPPPTNQSPNQNVLSASGDAAVIRITLFFLSGLNCAEAVNFAPADWLPHGSFGADLYKQFHKTTVLSHEELLCVVAQGWRSEMERNWIGCPTMILSSKDPRLYLHLAPEFAHYKGNHTYVHATRKGYWQFDMGDVIIDGKSTGYIVLMAVRPLLTRGLICWRFE* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3144 212 MobiDBLite consensus disorder prediction 35 61 - -
Tpr6g3144 212 Gene3D Cupin 72 134 - -
Tpr6g3144 212 PANTHER LYSINE-SPECIFIC DEMETHYLASE 76 131 - -
Tpr6g3144 212 PANTHER LYSINE-SPECIFIC DEMETHYLASE LID 76 131 - -
Tpr6g3144 212 MobiDBLite consensus disorder prediction 36 56 - -
Tpr6g3144 212 Pfam Eukaryotic aspartyl protease 159 190 IPR033121 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3144 Tpr-Chr6 33971241 33977502 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3144 77 125 JUMONJI Transcription Factor Family AT1G08620 55.102 3.82e-11 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3144 K11446 - gmx:100819576 95.9005