Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3126 ATGGGTTGCGTGAACTCCAAGAAAACCGGAGAAGCTGATACAGTTTCTCCGGTTGGACCTTACGTTTATTCGAGTTCTTCTCGAAAAAGGAGCAATGGTTCAGGTAGAAGCATGGTGGTGGAGACATCTCCATCTTCTAGAGGAAATTCTGGTGTTGTTGTGAATGTTACACATCAACAACAACATCAGGGTGACCTCAAACCCGCAGAGTGGAAAAAGGGAGATTTGAATGTCAAGATTGGTTTTTATCATAGGTTTGTTGAAGGTGAACAGATTGCTGCTGGTTGGCCTTCTTGGCTTACTTCTGTTGCTGGTGAAGCCATTCATGGTTTGGTCCCTCTCAAAACTGATTCTTTTGAGAAATTAGATAAGGTTGGACAAGGTACATATAGCAGTGTTTTCAAAGCACGCGAAGTCGAGACAGGGAGGATGGTTGCCTTGAAAAAGGTGCGGATGGACACACTTCAACCTGAGAGCATTAGGTTCATGGCGCGGGAGATAATAATCCTCCGCACACTGGACCACCCTAACATCATGAAGTTAGAGGGTATAATCACTTCACCACTATCAAATAGTATATACCTTGTATTTGAATACATGGAACATGATCTTGCTGGCCTAGTATCTAACCCCGATATCAAGTTCACAGACGCACAGATTAAGTGTTACATGAGACAGCTATTGAGTGGAATTGAGCACTGTCACCTACGAGGTATCATGCATCGAGACATTAAAGTATCAAATATATTAGTTAACAACGAAGGCATTCTCAAGATAGGAGACTTTGGATTAGCAAATAACACCGGCCCGAATAGCAAACGTCCTTTAACAAGCCGTGTGGTGACTCTATGGTATCGTCCTCCCGAGCTTTTAATGGGATCAACAAACTACGGAGTTACAGTGGATCTGTGGAGTATAGGGTGCGTGTTTGCGGAACTTTTTATAGGGAAACCTATCCTTAAGGGGAGAACTGAGGTGGAACAGTTGCACAAAATTTTTAAGCTTTGTGGATCTCCACCTGAACATTTTTGGAAAAGGAGTAAGCTTCCGCTTGCAACAATGTTTAAGCCTCAAACTAGTTACGAAAGCTCCCTTTCGGAGAGGTGTAAAGGTCATCTTCCTCCAACTGCTGTGGACCTACTTGAGACCTTACTCGCTGTTGATCCTTCCAAGCGTGGTACTGCCTCCTCTGCACTTATGTCCGAGTATTTCAACACCGCACCATATGCTTGTAGTCCATCACTCCTTCCAAAGTATCTACCAAGTAAAGAATTGGATGCTAAAAACCGGGAAGACATGCTCAGTATAAATCTCGCCCTCAGGAAAAAGAACGGTGGTGGTAAAGTGCGAGAGCGAGAGGCTCTAACATCAGGAAGGCAAAGAAGGGCCCATAAAGTTATTCAGGATCATAACAATGTCAACAAACCAACTATGAAAGAGGAAATGCAGAATATTTCTCAAAACCCTCGTAGAGACGATGATGGTAAAGAACATCAAACAAAGGGAAGAGTAGGAGCTATGCACAAAGAGCAACAAAGACATTTGTATGATGCAAAATCAGATAATGTACAAAGGTTGAATGGTTACAACGGCTATAGTGTGTACTCAGGACCAGCACCAGTCTCGGGATCTAGTGGCTTTACATGGGCGAAAAGAAGAAAGCCAGATGCTTCATCGGTATTATCAGATGGCTCAAGAAGTAAAATCAGTGCATTGGATCCAACCTTTGCAAAAGGCACTTATGATTTAACGAAGCAAGGGATAGAAGTTTCAGAAAGAAAATATCATTATAACACAAGGCATCACGATGAGATTCCCAAGCATGCAGTACCAAAGCACCTGGGTCATAAAGTAGAATCATTTGATGCAGCTGATGTATACAATGCCAATTACTTCATGGATCTTGATCTCATAGATAAATCCGATAATCAAATAGATGCACAGGACGACAAATATTACGGTGAACCTGTGGAGCAATCAGTACCAACAAATAAAAACGATGAGTTGTTACATTGGCATGAAAATAACATGTGGCGGCAATCTGTTCGTAAATCAAGGTTGGGAAGAGGTATGGAAGAATAA 2082 0.4232 MGCVNSKKTGEADTVSPVGPYVYSSSSRKRSNGSGRSMVVETSPSSRGNSGVVVNVTHQQQHQGDLKPAEWKKGDLNVKIGFYHRFVEGEQIAAGWPSWLTSVAGEAIHGLVPLKTDSFEKLDKVGQGTYSSVFKAREVETGRMVALKKVRMDTLQPESIRFMAREIIILRTLDHPNIMKLEGIITSPLSNSIYLVFEYMEHDLAGLVSNPDIKFTDAQIKCYMRQLLSGIEHCHLRGIMHRDIKVSNILVNNEGILKIGDFGLANNTGPNSKRPLTSRVVTLWYRPPELLMGSTNYGVTVDLWSIGCVFAELFIGKPILKGRTEVEQLHKIFKLCGSPPEHFWKRSKLPLATMFKPQTSYESSLSERCKGHLPPTAVDLLETLLAVDPSKRGTASSALMSEYFNTAPYACSPSLLPKYLPSKELDAKNREDMLSINLALRKKNGGGKVREREALTSGRQRRAHKVIQDHNNVNKPTMKEEMQNISQNPRRDDDGKEHQTKGRVGAMHKEQQRHLYDAKSDNVQRLNGYNGYSVYSGPAPVSGSSGFTWAKRRKPDASSVLSDGSRSKISALDPTFAKGTYDLTKQGIEVSERKYHYNTRHHDEIPKHAVPKHLGHKVESFDAADVYNANYFMDLDLIDKSDNQIDAQDDKYYGEPVEQSVPTNKNDELLHWHENNMWRQSVRKSRLGRGMEE* 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3126 693 Gene3D Transferase(Phosphotransferase) domain 1 202 439 - -
Tpr6g3126 693 MobiDBLite consensus disorder prediction 475 511 - -
Tpr6g3126 693 Gene3D Phosphorylase Kinase; domain 1 110 201 - -
Tpr6g3126 693 ProSitePatterns Protein kinases ATP-binding region signature. 125 148 IPR017441 GO:0005524
Tpr6g3126 693 CDD STKc_CDK9_like 119 404 - -
Tpr6g3126 693 SUPERFAMILY Protein kinase-like (PK-like) 113 409 IPR011009 -
Tpr6g3126 693 Pfam Protein kinase domain 119 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3126 693 ProSiteProfiles Protein kinase domain profile. 119 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3126 693 ProSitePatterns Serine/Threonine protein kinases active-site signature. 239 251 IPR008271 GO:0004672|GO:0006468
Tpr6g3126 693 MobiDBLite consensus disorder prediction 485 511 - -
Tpr6g3126 693 SMART serkin_6 119 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3126 693 PANTHER CYCLIN-DEPENDENT KINASE 77 588 - -
Tpr6g3126 693 PANTHER CELL DIVISION PROTEIN KINASE 77 588 - -
Tpr6g3126 693 MobiDBLite consensus disorder prediction 22 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3126 Tpr-Chr6 33796976 33802301 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3126 116 430 Core Cell Cycle Gene Families AT5G10270 47.879 7.11e-103 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Tpr6g3126 Pkinase 7.1e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3126 - - gmx:100781059 933.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3126 6 33796976 33802301 Tpr6g3126 6 33796976 33802301 ECH
Tpr6g3126 6 33796976 33802301 Tpr2g0311 2 3775749 3779932 ECH