Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3094 ATGGCTTTCACAAGTCATAACATAAATCACCTGTTCATTAATTTCCTCATATTCTGCACCTTTTGTTCATGTTGTAGTTCAGTCAACGACACAATTACATCATCCAAGTCACTCAAAGACCAAGAGACAATAACCTCAAACAACAAAGACTTCAAGCTAGGATTTTTCAGTCCAATAAATTCAACCAACCGTTACTTAGGAATTTGGTACATCAATGAAACCAACAACATATGGATTGCAAACAGAGATCAACCTCTTAAAGATTCATCTGGAATAGTCACAATTGACACAAATGGAAATCTTGTAATACTGAACAATCAAAATGGTACCATCATTTGGACAACAAATATTTCAAATACTTCAACAAATTCAACAGCTCAACTTGATGATTTAGGAAACTTGATTCTAAGAGACATCAATTCTGGAAGAACAATATGGGATAGTTTCTCACACCCTGCAGATGCAGGTGTTCCAACAATGAAAATTTCTACTAACAAAGTAACAGGTAAGCAAATAGTTTTTGTATCAAGAAAAAGTGACAATGATCCTTCTTCGGGACATTTTTCGATTAGTCTTGAAAGATTGGATGCCCCAGAAGTTTTTATTTGGCATGATAAAAAGATTCATTGGAGAAGTGGTCCATGGAACGGAACAGGTTTTATCGGATCGCCAATAACGTTAACCAAGTATTTATCAGGATGGCATTTATCTGCCATCAATGATGAAACTAATTTAATTTACACTTTCGAAGACAAAACTATATTTGCAATTCTCTCATTGACACCACAAGGAAAACTTAAGTTGGTTGAGTATAAGAATAAAAAGGTAATTTTTAGTATTACTGAAGAAAAAAATGAGTGTGATTTATATGGAAAATGTGGACCGTTTGGGAATTGTGATAAAACTAGTGTACCAATTTGTAGTTGTTTTGAAGGGTTTGAGCCAAAGAATATGGTGGAATGGAATTTAAGAAATTGGACCAATGGTTGTGTGAGGAAAGAAAGATTGAAGTGTGAGATGTTGAAGAATGGATCAAGTGAAGTGAAACAAGATGGTTTTTCTGTGAAACATAATATGAAAGTTCCTGATTTTATTGATTTTATTGACAGCTCAGATGGTAATCAAAATAAGTGTGGAACAGATTGTTTGAAAAATTGTTCTTGTTTGGCACATGCATACGATCCTTACATAGGGTGTATGTATTGGAGTCGAGAGTTAGTTGATTTGCAGAAATTTTCTCCTGGTGCTGGAGTTGATCTCTTCATCCGTGTACCGGCTGAATTAGCTGCAGTTGCAGATAATAAAAAGAAAAAAGGGCACAACAACAGTTTTATAATCATTCCTACTGTTGGAGGGATAGGAGCACTTACCTTAGTTATATGTGCTTATCTTTTGTGGAGCAAATGTTGTGCTAGACATAAAGAAAGACACTCTCAAAACTCGATTATGAGAAGACAAAAACAAATGAAATTGGATGAGCTACCACTATATGATTTTAAAAAGCTCGAAACTGCCACAAACAATTTTCACATTGATAACATGCTTGGGAAGGGAGGTTTTGGCCCCGTATACAAGGGCATAATGGAAGATGGTCAAGAAATTGCGGTGAAAAGACTCTCAAAAACATCTGGACAAGGAATAGAAGAATTCATGAATGAAGTATTGGTGATTTCAAAACTTCAACATCGAAATCTTGTAAGACTTCTTGGTTGTTGTGTTGAAAGACGCGAGCAAATGTTGGTTTATGAGTTGATGCCAAATAAGAGTTTGGATGCTTTTCTCTTTGATCCAATACAAAAGAAAATTTTAGATTGGAGAAAGAGGTCAAACATAATCGAAGGAATAGCTCGAGGTATACTCTATCTTCACAGAGACTCGAGACTAAAGATCATACATAGAGATTTGAAAGCAAGCAACATCTTACTTGATGGCGACATGATTCCAAAAATATCAGACTTTGGTTTAGCTAGAATTGTTAAAGGTGGAGACGATGATGAAGCTAACACAAACAGGGTTGTTGGAACATATGGTTATATGCCGCCTGAATATGCAATGGAGGGACTTTTCTCTGAGAAATCAGATGTCTATAGCTTTGGAGTTTTATTGCTAGAGATTGTTAGCGGAAGAAGAAACAGTAACTTTTATAACAACGAGGATTCTCTTAGCCTTGTAGGCTTTGCATGGAAGCTATGGTTAGAGGACAACATTATATCTCTAATAGATCCAGAAGTATGGGATGCATGCTTTGAGAGCAACATGTTGAGGTGCATACACATAGGACTACTTTGTGTGCAAGAACTTCCAAGAGAAAGGCCAAATATATCAACTGTTGTTTTGATGCTTATAAGTGAGATTACGCATCTTCCTCCTCCAGGGAAAGTTGCATTTGTTTACAGACGAAGTACACAATCTTCTCAAAAAAGTCATCAATCTAACTCAAACAACAATGTAACTCTGAGTGAAGTTCAAGGCAGATAA 2478 0.3579 MAFTSHNINHLFINFLIFCTFCSCCSSVNDTITSSKSLKDQETITSNNKDFKLGFFSPINSTNRYLGIWYINETNNIWIANRDQPLKDSSGIVTIDTNGNLVILNNQNGTIIWTTNISNTSTNSTAQLDDLGNLILRDINSGRTIWDSFSHPADAGVPTMKISTNKVTGKQIVFVSRKSDNDPSSGHFSISLERLDAPEVFIWHDKKIHWRSGPWNGTGFIGSPITLTKYLSGWHLSAINDETNLIYTFEDKTIFAILSLTPQGKLKLVEYKNKKVIFSITEEKNECDLYGKCGPFGNCDKTSVPICSCFEGFEPKNMVEWNLRNWTNGCVRKERLKCEMLKNGSSEVKQDGFSVKHNMKVPDFIDFIDSSDGNQNKCGTDCLKNCSCLAHAYDPYIGCMYWSRELVDLQKFSPGAGVDLFIRVPAELAAVADNKKKKGHNNSFIIIPTVGGIGALTLVICAYLLWSKCCARHKERHSQNSIMRRQKQMKLDELPLYDFKKLETATNNFHIDNMLGKGGFGPVYKGIMEDGQEIAVKRLSKTSGQGIEEFMNEVLVISKLQHRNLVRLLGCCVERREQMLVYELMPNKSLDAFLFDPIQKKILDWRKRSNIIEGIARGILYLHRDSRLKIIHRDLKASNILLDGDMIPKISDFGLARIVKGGDDDEANTNRVVGTYGYMPPEYAMEGLFSEKSDVYSFGVLLLEIVSGRRNSNFYNNEDSLSLVGFAWKLWLEDNIISLIDPEVWDACFESNMLRCIHIGLLCVQELPRERPNISTVVLMLISEITHLPPPGKVAFVYRRSTQSSQKSHQSNSNNNVTLSEVQGR* 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3094 825 SUPERFAMILY alpha-D-mannose-specific plant lectins 66 217 IPR036426 -
Tpr6g3094 825 SMART serkin_6 509 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3094 825 ProSiteProfiles Bulb-type lectin domain profile. 29 149 IPR001480 -
Tpr6g3094 825 MobiDBLite consensus disorder prediction 804 825 - -
Tpr6g3094 825 Pfam Protein tyrosine and serine/threonine kinase 510 721 IPR001245 GO:0004672|GO:0006468
Tpr6g3094 825 PIRSF SRK 2 825 IPR024171 GO:0004674
Tpr6g3094 825 Gene3D - 23 150 IPR036426 -
Tpr6g3094 825 Gene3D Phosphorylase Kinase; domain 1 467 584 - -
Tpr6g3094 825 ProSiteProfiles PAN/Apple domain profile. 338 425 IPR003609 -
Tpr6g3094 825 CDD PAN_AP_plant 343 425 - -
Tpr6g3094 825 SMART blect_4 35 152 IPR001480 -
Tpr6g3094 825 ProSitePatterns Serine/Threonine protein kinases active-site signature. 630 642 IPR008271 GO:0004672|GO:0006468
Tpr6g3094 825 SMART ntp_6 348 424 IPR003609 -
Tpr6g3094 825 ProSiteProfiles Protein kinase domain profile. 509 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3094 825 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 19 824 - -
Tpr6g3094 825 CDD STKc_IRAK 515 781 - -
Tpr6g3094 825 SUPERFAMILY Protein kinase-like (PK-like) 494 807 IPR011009 -
Tpr6g3094 825 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 19 824 - -
Tpr6g3094 825 Gene3D Transferase(Phosphotransferase) domain 1 585 787 - -
Tpr6g3094 825 Pfam D-mannose binding lectin 77 178 IPR001480 -
Tpr6g3094 825 CDD B_lectin 35 152 IPR001480 -
Tpr6g3094 825 Pfam PAN-like domain 349 409 IPR003609 -
Tpr6g3094 825 Pfam S-locus glycoprotein domain 210 317 IPR000858 GO:0048544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3094 Tpr-Chr6 33527757 33532127 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3094 458 820 Receptor kinase-like Gene Family AT4G23150 53.297 4.12e-125 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr6g3094 PK_Tyr_Ser-Thr 5.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3094 - - mtr:MTR_8g013600 1239.94