Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3093 ATGGCTTCCCTAAATCATAACATAAATCACTTGTTCATTACTTTGCTCATATTTTGTACCTTTTTTTCATGTTATAGTTCACTCAACGACACAATTACATCATCCAAATCACTCAAAGACCAACAAACAATAACCTCAAACAACACAAACTTCAAGCTAGGATTTTTCAGCCCAATAAATTCAACAAACCGTTACCTAGGAATTTGGTACATCAATGAAACCAACAACATATGGATTGCAAACAGAGATCAACCTCTTAAAGATTCAAATGGAATAGTCTCAATTGACAAAGATGGAAATCTTGTAATATTGAACAATCAAAATGGTACCATCATTTGGACAACAAATATTTCAAATACTTCAACAAATTCAACAGCTCAACTTAATGATTCAGGAAACTTGATTCTAAGGGACAACAATTCTGGAATAATAATTTGGGATAGTTTCTCACACCCTGCAGATGCAGCTGTTCCAACTATGAGAATTTCTACTAATAAAATAACAGGTAAGAAAATAGCTTTTGTAGCAAGAAAAAGTGACAATGATCCTTCTTCAGGACCATTTTCAGCCAGTATTGAAAGATTGGGTACCCCGGAAGTGTTTATTTGGCATGATACAAATATTCATTGGAGAACTGGTCCATGGAATGGAAGAGTTTTTCTCGGATCGCCAAGAATGTTAACCTTGTATTTATCCGGTTGGCGTTTAGTTCAGGACGATGATGAAACTTATTTAACTTACGATTTCAACGACAAAACTATGTTTGCAATTCTCTCATTGACACCACATGGAAAACTTAGGTTGTTTGAATATAGGAATAAAAAGGTAACTGTTAATATTACTGTTGGTCAAAATGAGTGTGATTTATATGGAAAATGTGGACCTTTTGGGAATTGTGATAATTCTAGAGTACCAATTTGTAGCTGTTTTGAGGGGTTTGAGCCAACGAATTTGGTGGAGTGGAGTTTAAATAACTGGACTAATGGTTGTGTGAGGAAAGAAGGATTTAACTTCAAGTGTGAGATGTTGAAGATTAATGGATCAAGTGAATTCAAACAAGATGGATTTTTGGTGAAACAAAATATGAAAGTTCCTGATTTTATTGAGAGATCAGATGGTGATCAAAACAAGTGTGGACCAGATTGTTTGGCAAATTGTTCTTGTTTGGCACATGCATACGATCCTAACATAGGTTGTATGTATTGGAGTCGAGAGTTAGTTGATTTGCAAAAATTTCCTTTTGGAGGAGTTGATCTCTTCATTCGTGTACCGGCTGAAATAGTTGCAGATAATAAAAAGAAAAAAGAGCTCAACAAGAGTTTTATAATCATTCCTATTGTTGGAGGGATAGGAGCATTTACCTTGGTTATATGTGCTTACCTTTTGTGGAGGAAATGTTCTGCTAGACATAGAGAAAGACATCCTCAAAAATCGATTATGAGAGGACAAAATCAAATGAAATTGGATGAGCTACCACTATATGATTTCAAAAAGCTCGAAACTGCCACAAACAGTTTTCACATTGGTAATATGCTCGGAAAGGGAGGTTTTGGACCAGTATACAAGGGAATAATGGAAGATGGTCATGAAATTGCGGTGAAAAGACTCTCAAAAGCATCTGGACAAGGAATAGAAGAATTCATGAATGAAGTATTAGTGATTTCAAAACTTCAACATCGAAATCTTGTGAGACTTCTTGGTTGTTGTGTTGAAAACGGCGAACAAATTTTGGTTTATGAGTTCATGCCAAATAAGAGTTTGGATGCCTTTCTCTTTGATTGGAGAAAGAGGTCAAACATAATCGAAGGAATAGCTCGAGGTATACTCTATCTTCATAGAGACTCGAGACTAAAGATCATACATAGAGATTTGAAAGCAAGCAACATCTTACTTGATGGTGACATGATTCCAAAAATATCAGACTTTGGTTTAGCTAGAATTGTTAAAGGAGGCGAAGATGACGAAGCTAACACAAACAGAGTTGTTGGAACATATGGTTATATGCCGCCTGAATATGCAATGGAGGGACTTTTCTCTGAGAAATCAGATGTCTATAGCTTTGGGGTTTTATTGCTAGAGATTGTTAGCGGAAGAAGAAATAGTAGCTTTTATAACCACGAGGATTCTCTTAGTCTCATAGGCTTTGCATGGAAGCTATGGTTAGAAGACAACATTATATCTCTAATAGATCCAGAAGTATGGGATGCATGCAATGAGAGCAGCATGTTGAGGTGCATACAAATAGGACTTCTTTGTGTGCAAGAACTTCCAAGAGAAAGACCAAATATATCAACTGTTGTTTTGATGCTCATAAGTGAGATTACACATCTTCCTCCTCCAGGGAAAGTTGCATTTGTTTACAAGCAAAATCCAAGTACAAAATCTTCTCAAAAAAGTCATGAATCTAACTCAAACAACAATGTAACTCTGAGTGAAGTTCATGGCAGATAA 2451 0.3578 MASLNHNINHLFITLLIFCTFFSCYSSLNDTITSSKSLKDQQTITSNNTNFKLGFFSPINSTNRYLGIWYINETNNIWIANRDQPLKDSNGIVSIDKDGNLVILNNQNGTIIWTTNISNTSTNSTAQLNDSGNLILRDNNSGIIIWDSFSHPADAAVPTMRISTNKITGKKIAFVARKSDNDPSSGPFSASIERLGTPEVFIWHDTNIHWRTGPWNGRVFLGSPRMLTLYLSGWRLVQDDDETYLTYDFNDKTMFAILSLTPHGKLRLFEYRNKKVTVNITVGQNECDLYGKCGPFGNCDNSRVPICSCFEGFEPTNLVEWSLNNWTNGCVRKEGFNFKCEMLKINGSSEFKQDGFLVKQNMKVPDFIERSDGDQNKCGPDCLANCSCLAHAYDPNIGCMYWSRELVDLQKFPFGGVDLFIRVPAEIVADNKKKKELNKSFIIIPIVGGIGAFTLVICAYLLWRKCSARHRERHPQKSIMRGQNQMKLDELPLYDFKKLETATNSFHIGNMLGKGGFGPVYKGIMEDGHEIAVKRLSKASGQGIEEFMNEVLVISKLQHRNLVRLLGCCVENGEQILVYEFMPNKSLDAFLFDWRKRSNIIEGIARGILYLHRDSRLKIIHRDLKASNILLDGDMIPKISDFGLARIVKGGEDDEANTNRVVGTYGYMPPEYAMEGLFSEKSDVYSFGVLLLEIVSGRRNSSFYNHEDSLSLIGFAWKLWLEDNIISLIDPEVWDACNESSMLRCIQIGLLCVQELPRERPNISTVVLMLISEITHLPPPGKVAFVYKQNPSTKSSQKSHESNSNNNVTLSEVHGR* 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3093 816 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 19 814 - -
Tpr6g3093 816 ProSiteProfiles Bulb-type lectin domain profile. 29 149 IPR001480 -
Tpr6g3093 816 Gene3D Transferase(Phosphotransferase) domain 1 582 776 - -
Tpr6g3093 816 Pfam D-mannose binding lectin 77 178 IPR001480 -
Tpr6g3093 816 ProSiteProfiles Protein kinase domain profile. 506 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3093 816 Pfam PAN-like domain 352 409 IPR003609 -
Tpr6g3093 816 CDD PAN_AP_plant 344 424 - -
Tpr6g3093 816 SUPERFAMILY Protein kinase-like (PK-like) 491 802 IPR011009 -
Tpr6g3093 816 ProSiteProfiles PAN/Apple domain profile. 340 424 IPR003609 -
Tpr6g3093 816 PIRSF SRK 2 816 IPR024171 GO:0004674
Tpr6g3093 816 SMART serkin_6 506 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3093 816 Pfam Protein tyrosine and serine/threonine kinase 507 767 IPR001245 GO:0004672|GO:0006468
Tpr6g3093 816 Gene3D Phosphorylase Kinase; domain 1 465 581 - -
Tpr6g3093 816 CDD STKc_IRAK 512 770 - -
Tpr6g3093 816 CDD B_lectin 35 152 IPR001480 -
Tpr6g3093 816 Pfam S-locus glycoprotein domain 210 316 IPR000858 GO:0048544
Tpr6g3093 816 ProSitePatterns Serine/Threonine protein kinases active-site signature. 619 631 IPR008271 GO:0004672|GO:0006468
Tpr6g3093 816 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 19 814 - -
Tpr6g3093 816 SUPERFAMILY alpha-D-mannose-specific plant lectins 66 217 IPR036426 -
Tpr6g3093 816 Gene3D - 23 150 IPR036426 -
Tpr6g3093 816 SMART blect_4 35 152 IPR001480 -
Tpr6g3093 816 MobiDBLite consensus disorder prediction 790 816 - -
Tpr6g3093 816 SMART ntp_6 351 423 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3093 Tpr-Chr6 33521864 33525639 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3093 455 811 Receptor kinase-like Gene Family AT4G23150 50.959 1.83e-117 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr6g3093 PK_Tyr_Ser-Thr 1.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3093 - - mtr:MTR_8g013600 1256.51