Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3086 ATGGCTTCCAACAACAACAACAACAACATTAAAATCCATGAACACTTCAAAGTTGTTCCTCCACCATCATCAACCCAAACATCAACAACACCTCTCACTTTCTTTGACATATTTTGGCTAAGGTTTCATCCGGTAGAAAGAATCTTCTACTACACCCTCCCAAATTCACAATCACACCCTTCTTTTTTCTACCAAAATATTGTTCCAAAACTCAAAACCTCACTTTCTTTAACCCTCCAACACTTTCTACCTTTAGCCGGTAAAATCATTTGGCCTTCTGATTCTCCCAAACCATTCATCCAATTCAATCCTAATGATGATGATGGTGTTTCCTTACTCATTGCAGAGTCTGATTTAGATTTTAACCATGTGATTGAAAACTCACCCCATGAAACTTCTTTGTCGAATTCTTTTGTACCTCACTTAGAATCAACAGATTCTTTTGCTTCTGTTATCTCATTTCAAATAACCCTTTTTCCAAAAAGTGGTTTTTCCATTGGAATAAGCACACATCATGCTGTTCTTGATGGAAAATCTTCAACTATGTTCCTCAAAGCTTGGGCTTATATATGCAACAAAATCATTGAAACCGAAGAATCGCCAATTTTGTTGCCAAAGTTAGAACCTTCATTCGACAGGGAAATCAAAGATCAAAATGGACTCGGTGATACATTCGCAAGTAACTGGATTGAGATCATGGCAAAAATGTTCCCAGATGAAAAAGGAAACGAACGATGCTTGAAGATTTTTCCTTTTCAACCAAAACTAGATGACTATGTTCGTGCTACGTTCGAGCTCACACGAGAAGATTTGAGTAAGATAAAGCAAATGGTGTAACTGTTATCCAAATGGGAAATATTTGATACAAATGACTCAAAGCCCCAAACACTGTCATCTTTTGTTCTCACTTGTGCTTATTCGCTCGTTTGTCTTGCAAAAGCGATTCATGGAGTTGAAAAGGAGAAAGAAAAATTTGCTTTTGGGTTCACCGTTGATTGTAGAGCAAGGTTAGAGCCACCAATAACAAATAACTATTTTGGAAATTGTGTATGGGGACACTTAATTGATACAAAACCATGTGATTTCATAAAAGAAGATGGAGTTTTTTTAGTTGCTAAGAGCATTCATGAGAAAATAGTGATGATAAACGAAAAGGGTGCTCTTGAAGGAACTAATGGTGCTTTTGATAAATATACTTCTATGACAAGTAAAGGAATTGAAATTATAGGAGTGGCGGGGTCTAATAGATTTGGTGTTTATGAGATTGATTTTGGTTGGGGAAGGCCGGAAAAGGTGGAGATAGTATCAGTTGATAGAGGTTTAACCATTGGTTTGGCTGAGAGCAAAAATGGCAAAGGTGGAATTGAAGTTGGGTTGGTTCTTAATAGACATGCCATGGATCTCTTTACCACTTTGTTTCTTGAAGGTTTGCATTAA 1437 0.3688 MASNNNNNNIKIHEHFKVVPPPSSTQTSTTPLTFFDIFWLRFHPVERIFYYTLPNSQSHPSFFYQNIVPKLKTSLSLTLQHFLPLAGKIIWPSDSPKPFIQFNPNDDDGVSLLIAESDLDFNHVIENSPHETSLSNSFVPHLESTDSFASVISFQITLFPKSGFSIGISTHHAVLDGKSSTMFLKAWAYICNKIIETEESPILLPKLEPSFDREIKDQNGLGDTFASNWIEIMAKMFPDEKGNERCLKIFPFQPKLDDYVRATFELTREDLSKIKQMV*LLSKWEIFDTNDSKPQTLSSFVLTCAYSLVCLAKAIHGVEKEKEKFAFGFTVDCRARLEPPITNNYFGNCVWGHLIDTKPCDFIKEDGVFLVAKSIHEKIVMINEKGALEGTNGAFDKYTSMTSKGIEIIGVAGSNRFGVYEIDFGWGRPEKVEIVSVDRGLTIGLAESKNGKGGIEVGLVLNRHAMDLFTTLFLEGLH* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3086 477 Gene3D - 5 237 IPR023213 -
Tpr6g3086 477 Pfam Transferase family 17 469 - -
Tpr6g3086 477 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 7 477 - -
Tpr6g3086 477 Gene3D - 256 477 IPR023213 -
Tpr6g3086 477 PANTHER - 7 477 - -
Tpr6g3086 477 SUPERFAMILY CoA-dependent acyltransferases 293 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3086 Tpr-Chr6 33467584 33469748 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3086 10 474 Monolignol Biosynthesis Gene Families AT5G48930 23.203 2.02e-14 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3086 - - gmx:100814826 600.512