Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3069 ATGGCTGTAGAGGAATCTGAGCAAGTGATTCCTGATTTAGAAAGAGAGGATAATTTAATTGCTGCAGCAAGGCATATTGTGATGGCTTTAGGGTCTAAGAAGAATCTTACTAATGATGAAAAGAAGATTCTTTCTGATCTTGGATCACAGTTGTCTTCGATGAACATACAAAGTGAGAAGGAGGAAGGGAAGATAGGGAAAAGGGAGGATGATGTTGATGTGGAGGATGAGGTGGATGAGGAGGAGGAAGAGGGTGTTGGTGTTATTGAAGAACGGATTGGTTTGATTGAGGAGAAAATAATGAAATGGGAAGAAGATCAATCGATGATTTGGGATTTGGGACCTGAAGAAACGTCTGAGTATTTGAATGCGGCTAATGATGCGCGCATATTGATCGATAAGTTGGAGAGTATGCATTTGAGTAAAGAGGATCAAGAGTATAAGTTTTTGCAAAGGGCTTATAGTGTTCTTCAGACAGCTATGACACGGCTCGAAGAAGAGTTCAGCAACTTGCTTATCCAGAATAGGCAACCTTTTGAACCGGAGTATGTCTCCTTTCGATCGAGCGAGGAAGATGCTGTAGATGGGAATTCTTTTGTCTCTTTAGGTGATGAATCATTTGAGGAATCACTTCGAAGGGATAGTGTTAGCCGAGCTGCTGAGGAGCATGTCATTGATTTAGTGCATCCGGCCGTGATTCCTGACCTCAGGTGCATTGCAAACTTGCTTTTCGCTTCGAATTATTCTCAAGAATGTGCACAAGCTTATACCATTGTTAGGAGGGATGCTTTAGACGAGTGTTTGTTCATTCTTGAAATGGAAAGGCTAAGTATTGAAGATGTTTTGAAAATGGAGTGGAGCACTTTGAATTCAAAGATCAAAAGATGGAGTTGGGCTGTGAAAATCTTTGTTAGGGTTTATCTTGCAAGTGAAAGGTGGCTTAGTGACCAAATTTTTGGAGAAGGCGAGCCGGTTAGTCAAGTTTCTTTTGTCGATGCATCAAAAGCTTCAATTTTGCAGCTTCTGAATTTCGGTGAAGCTATGTCTATTGGTCCTCACCAACCCGAGAAGTTGTTTCGAATTCTCGACATGTATGAAGTTCTTAGAGACCTTATGCCTGACATTGATGCTTTGTATCCGGACGAGGTTGGTTCCTCGGTTAAATTTGAATGTCATGAGGTTCTGACAAGATTGGGAGATTGTGTGAGGATAACATTTCTTGAATTCAAAAACACCGTTGGTTCGAATCCGTCAACAACACCTCTAGTTGGTGGAGGGATACATCCTTTGGCGAGGTATGTTATGAATTATCTTAGAACTCTTACCGATTACGGTGAAGCGCTGAATCATCTTTTGAAAGACCAAGAAGAAGAAGATTCCATTTCATCGTCACCTGACACAAGTCCAGGTGCCGAAGAAGATAACAGAAGCCAAGGATCTCCCGGTAGATTTCCCTCGATGTCGCGGCAATTCCTATCATTTTCCTCAGTCTTGGAAAACAATCTTGAGGAGAAATCAAAGTTATACAAAGAAACTTCATTGCAGCACTTGTTCTTAATGAACAACCTACATTATATGGCTGAAAAGGTTAAAGGGTCTGAACTTAGGGTCATATTCGGAGACGAATGGATTCGAAAACACAACTGGAAGTTTCAGCAGCACGCAATGAAATACGAGAGAGCTAGTTGGAGTTCAATTCTCAACTTACTTAAGGACGAAGGAATTCATGCTCCCGGTTCGAATTCTGTCTCAAAATCTCTTCTGAAGGAAAAGCTAAGAAGCTTCTACCTCGGCTTTGAGGATATTTACAGGATTCAAACGGCTTGGTCGATTCCAGATGTTCAGCTTCGTGAAGATTTGCGGATTTCTATATCAGTTAAAGTGATTCAAGCTTATAGAACATTTGTTGGAAGGAATAATAGTCATATGAGTGACAAAAATATTAGATACACTGCTGATGATTTAGAAAATTATCTTTTGGATTTCTTTGAAGGTGCTCAAAAGTTGTTGCAAAATCCTCATAGGAGGTGA 2031 0.4062 MAVEESEQVIPDLEREDNLIAAARHIVMALGSKKNLTNDEKKILSDLGSQLSSMNIQSEKEEGKIGKREDDVDVEDEVDEEEEEGVGVIEERIGLIEEKIMKWEEDQSMIWDLGPEETSEYLNAANDARILIDKLESMHLSKEDQEYKFLQRAYSVLQTAMTRLEEEFSNLLIQNRQPFEPEYVSFRSSEEDAVDGNSFVSLGDESFEESLRRDSVSRAAEEHVIDLVHPAVIPDLRCIANLLFASNYSQECAQAYTIVRRDALDECLFILEMERLSIEDVLKMEWSTLNSKIKRWSWAVKIFVRVYLASERWLSDQIFGEGEPVSQVSFVDASKASILQLLNFGEAMSIGPHQPEKLFRILDMYEVLRDLMPDIDALYPDEVGSSVKFECHEVLTRLGDCVRITFLEFKNTVGSNPSTTPLVGGGIHPLARYVMNYLRTLTDYGEALNHLLKDQEEEDSISSSPDTSPGAEEDNRSQGSPGRFPSMSRQFLSFSSVLENNLEEKSKLYKETSLQHLFLMNNLHYMAEKVKGSELRVIFGDEWIRKHNWKFQQHAMKYERASWSSILNLLKDEGIHAPGSNSVSKSLLKEKLRSFYLGFEDIYRIQTAWSIPDVQLREDLRISISVKVIQAYRTFVGRNNSHMSDKNIRYTADDLENYLLDFFEGAQKLLQNPHRR* 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3069 676 Pfam Exo70 exocyst complex subunit 294 660 IPR046364 GO:0000145|GO:0005546|GO:0006887
Tpr6g3069 676 SUPERFAMILY Cullin repeat-like 106 664 IPR016159 -
Tpr6g3069 676 MobiDBLite consensus disorder prediction 462 483 - -
Tpr6g3069 676 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 22 670 - -
Tpr6g3069 676 PANTHER EXOCYST COMPLEX PROTEIN EXO70 22 670 IPR004140 GO:0000145|GO:0006887
Tpr6g3069 676 Coils Coil 147 167 - -
Tpr6g3069 676 MobiDBLite consensus disorder prediction 455 483 - -
Tpr6g3069 676 MobiDBLite consensus disorder prediction 54 84 - -
Tpr6g3069 676 Gene3D Exocyst complex component Exo70 101 671 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3069 Tpr-Chr6 33331641 33334559 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3069 12 676 EXO70 exocyst subunit family AT3G29400 48.083 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3069 K07195 - gmx:100799102 1085.09