Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3057 ATGGATGGACCAGCTGGGCAAGGTGGTGTTGGTTCAAGTATAGACTCGTTACTGCAACATTATAAATTGGGAAAAACACTTGGTATTGGAACCTTTGCCACGGTGAAAATTGCTGAACATGTACTCACTCGTCATAAGGTTGCCATCAAAATCCTTAACCGTTGCAAGATGAAGAACAAGGATATGGAAGAAATAGTCAAAAGAGAAATAAAAATTTTAAGACTATGCATGCATCCTCACATCGTACGGCTGTATGAGGTGATAGAGACGGAAACTGACATATATATTGTCATGGAGTATATGAAATCTGGGGAGCTATATTATTATATTTCAGAAAAGGGCAGGTTAAAAGAAGACGAAGCTCGTAATTTCTTTCAGCAGATAATATCTGGTGTCGAATACTGTCACAGAAATATGGTTGTTCATAGGGATCTGAAGCTAGAGAATTTGCTCTTAGACTCTAAATGCAATGTCGTCAAGATAGCTGATTTTGGTTTAAGCAGCATAATGCGTGACGGACACTTTCTTAAGACAAGTTGTGGCAGCCCGGCCTATGCAGCTCCCGAGGTTATGTCTGGGAGATTGTATGCTGGACCTGAAGTAGATGTCTGGAGCTGTGGTGTTATTTTATATGCTCTTCTTTGTCGAACTCTTCCTTTTATTGATGTAAACATTTCAGATCTCGTAGAGAAAATGAAGGGAGGAAGATACACTCTTCCTAGTCATCTGTCACCGGGTGCTAGAGATTTGATACAAAGGATGCTGCTAGCTGACCCTATGAAGAGGATCACCATACCTGAGATTCGTCAACATCCATGGTTCAAACTCAGACTTCCGCGTTATTTAGCTGTGCCACCGCCCAATACAATGCAACAGGCTAACAAGATTGATGAGGATATCCTTCTGGAAGTGATAAAAATGGGATTTGACAGCGATCAATTGATTGAATCTCTTCGGCACAGGATACAGAATGAGGTTTGCAACTTTCATTTTTTTCCTCGTTTATCTGCTGAATTTTCTCTAATTACTGCCCATATGTTCCAGGGTACCGTGGCATACTATATAATATTAGACAACCGGTTCCGTGTTTCCAGTGGCTGTCTTGGAGCTGAGTATCAAGAGTCCATGGACTCTAGTCTTAGCCAAATGCGTGAAGTTTCTTCTTCTGTTGCTGGACATAGCATTCCGGGCTATATGGATCCAAGAGCTGGATTGAGACCACAGCTCCCTGTTGAAAGAAAATGGAATCTTGGGCTTCAGTCTCGAGCTCATCCTCATCTAATAATGACCGTGGTCCTTAATGCTCTCCGAGAATTAAATGTTTGTTGGAAGAAGATTGGGCACTACAACATCAAGTGCAGGTGGGTTGCTGGCATTCTCAGTCATAATGAAGGAACGATGAACAATGCTGCGCATAATAATCATTACTTTAGTGATGATTCCAGCATTATTGAGAATGTAGCTGTCTCGAATTCAAATGAAGTCAAATTTGAACTGCAGCTTTATGAAACTCGGGAACAGAAGTATCTTCTTGATCTTCAAAGGGTGCATGGTCCGGAGTTTCTTTTCTTGGATCTTTGTGCCGCTTTCCTTTCACAGCTTCGTGTCTTCTAG 1614 0.4151 MDGPAGQGGVGSSIDSLLQHYKLGKTLGIGTFATVKIAEHVLTRHKVAIKILNRCKMKNKDMEEIVKREIKILRLCMHPHIVRLYEVIETETDIYIVMEYMKSGELYYYISEKGRLKEDEARNFFQQIISGVEYCHRNMVVHRDLKLENLLLDSKCNVVKIADFGLSSIMRDGHFLKTSCGSPAYAAPEVMSGRLYAGPEVDVWSCGVILYALLCRTLPFIDVNISDLVEKMKGGRYTLPSHLSPGARDLIQRMLLADPMKRITIPEIRQHPWFKLRLPRYLAVPPPNTMQQANKIDEDILLEVIKMGFDSDQLIESLRHRIQNEVCNFHFFPRLSAEFSLITAHMFQGTVAYYIILDNRFRVSSGCLGAEYQESMDSSLSQMREVSSSVAGHSIPGYMDPRAGLRPQLPVERKWNLGLQSRAHPHLIMTVVLNALRELNVCWKKIGHYNIKCRWVAGILSHNEGTMNNAAHNNHYFSDDSSIIENVAVSNSNEVKFELQLYETREQKYLLDLQRVHGPEFLFLDLCAAFLSQLRVF* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3057 537 ProSiteProfiles Kinase associated domain 1 (KA1) profile. 488 536 IPR001772 -
Tpr6g3057 537 SMART serkin_6 21 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3057 537 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Tpr6g3057 537 SUPERFAMILY KA1-like 354 536 IPR028375 -
Tpr6g3057 537 Pfam Protein kinase domain 21 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3057 537 ProSitePatterns Protein kinases ATP-binding region signature. 27 50 IPR017441 GO:0005524
Tpr6g3057 537 ProSiteProfiles Protein kinase domain profile. 21 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3057 537 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 295 324 IPR015940 -
Tpr6g3057 537 SUPERFAMILY Protein kinase-like (PK-like) 18 275 IPR011009 -
Tpr6g3057 537 CDD STKc_AMPK_alpha 20 274 - -
Tpr6g3057 537 CDD AMPKA_C 412 534 - -
Tpr6g3057 537 Gene3D Transferase(Phosphotransferase) domain 1 12 345 - -
Tpr6g3057 537 Gene3D Kinase associated domain 1, KA1 418 535 - -
Tpr6g3057 537 PANTHER SERINE/THREONINE KINASE 10 536 - -
Tpr6g3057 537 CDD UBA_SnRK1_plant 296 359 - -
Tpr6g3057 537 Pfam Kinase associated domain 1 494 536 IPR001772 -
Tpr6g3057 537 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 10 536 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3057 Tpr-Chr6 33201475 33204994 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3057 21 274 CBL-interacting serine-threonine protein kinases AT4G24400 49.804 2.57e-82 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_AMPK Tpr6g3057 Pkinase 1.8e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3057 K07198 - gmx:100796687 798.505