Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3055 ATGGCTTCTCTAAACAATCACATCAAAATCCATGAACAATGCAAAGTTGCTCCTCATTCTTCAACCCAATTATCTCTTCCTCTCACTTTCTTTGACTTGATTTGGCTAAGGTTCCATCCAGTAGAACGCATCTTCTTCTACACCCTCCCAAATTCCGAATCACACCCTTCTTTCTTCTTCCATAATCTTGTTCCAAAACTCAAAACCTCACTCTCTTTAACCCTCCAACACTTCCTTCCTTTAGCCGGTAATATCGTTTGGCCTTCTGATTCTCCGAAACCATTCATCCAATTCAATCCAAACGACGATGGAGTTTCTTTGCTCTTAGCTCAGTCTGATGATGATATAGACTTTAATAAAATCTTGGAGCACAATTCACCACATGAAGCTTCTTTGTCTCGTTCTTTTGTACCAAACTTAGAATCAACTGATTCTTTTGCTTCTATTATCTCAATTCAAATAACTCTTTTCCCCAAAAGTGGTTTTTCTATTGGAATAAGCACACACCATGCTGTTCTTGATGGAAAATCTTCAACCATGTTCGTCAAAGCTTGGGCTTCTATAAGTAAATCACTTGAAGAAACAAAAGCACCAACTTTGGAACCTTTTTTAGAACCCTTTTTGGAAAGGGAAGTAATCAAAGATCCAAAGGATCTTGAGAATGTTTTCATAAATACTTGGAACAGAATCTCATCACATTTTGATAGGAGCAATGTAAGAAGCATAAAGATTATGTCAAACATGTTTCAACCAATCATTAAGGATTCCGTTCGAGCCACGTTCGAGCTCACACGCACGGATTTGGAGAAATTAAACAAAAGTATATTGTCCAAATGGAACAATGTTGTAGAAGAAGCACAAGAACAAGAACAAGAACATCCAAAGAAATTATCAAGTTTTGTTCTTACATGTTCTTATGTGTCTGTTTGCATAGCAAAAGCGATACAACAATCCGAAAGCGATAAAAGGCAGAAATTTTCATTTGGTTTTCCTGTTGATTGTAGAGATAGATTAGATCATCCAATTCCCGAAAACTATTTCGGAAATTGTGTAACTAATCATATAGTTGATACTGAGCCAGAGGATTTTACAAAAGAAGATGGTATGGTGATTGTTGCTAAGAAAATTTATGATAAAATAAAAAAAATGGATAAGGGTAGTGTTCTTGATGGATTAGATACATTGATGTTTAAATTAATGGCTATGTTTGGGGAAGGAGTTAAAGGAATGGGAGTTGCTGGTTCAACAAGATTTGGAGTATATGAGATTGATTTTGGTTTTGGAAAGCCTGAAAAAGTGGAGATTACTTCAATTGATAGAGGATTAACAATTGGATTAACAGAAAGAAAGGATTTGAAAGGTGGTGTTGAAGTTGGACTTGTTCTTGATAAGAATGTGATGGATTTGTTTCATACCATTTTTCATGAAGGCATATGTTTTGATTCATGA 1449 0.3547 MASLNNHIKIHEQCKVAPHSSTQLSLPLTFFDLIWLRFHPVERIFFYTLPNSESHPSFFFHNLVPKLKTSLSLTLQHFLPLAGNIVWPSDSPKPFIQFNPNDDGVSLLLAQSDDDIDFNKILEHNSPHEASLSRSFVPNLESTDSFASIISIQITLFPKSGFSIGISTHHAVLDGKSSTMFVKAWASISKSLEETKAPTLEPFLEPFLEREVIKDPKDLENVFINTWNRISSHFDRSNVRSIKIMSNMFQPIIKDSVRATFELTRTDLEKLNKSILSKWNNVVEEAQEQEQEHPKKLSSFVLTCSYVSVCIAKAIQQSESDKRQKFSFGFPVDCRDRLDHPIPENYFGNCVTNHIVDTEPEDFTKEDGMVIVAKKIYDKIKKMDKGSVLDGLDTLMFKLMAMFGEGVKGMGVAGSTRFGVYEIDFGFGKPEKVEITSIDRGLTIGLTERKDLKGGVEVGLVLDKNVMDLFHTIFHEGICFDS* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3055 482 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 5 479 - -
Tpr6g3055 482 SUPERFAMILY CoA-dependent acyltransferases 315 453 - -
Tpr6g3055 482 Gene3D - 253 480 IPR023213 -
Tpr6g3055 482 PANTHER - 5 479 - -
Tpr6g3055 482 Pfam Transferase family 11 472 - -
Tpr6g3055 482 Gene3D - 7 240 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3055 Tpr-Chr6 33184023 33185812 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3055 8 476 Monolignol Biosynthesis Gene Families AT5G48930 23.918 4.51e-22 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3055 - - gmx:100813762 558.91