Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3051 ATGGCTTCCAACAACATTAAAATCCATCAACAATTCAAAGTTGTTCCTCTACCATCATCAACCCAAACATCAACAACACCTCTCACTTTCTTTGACATATATTGGCTAAGATTTCATCCAGTAGAAAGAATCTTCTTCTACACCCTCCCAAATTCACAATCACACCCTACTTTTTTCTACCAAAATATTGTTCCAAGACTCAAAACCTCACTTTCTTTAACCCTCCAACACTTTCTACCTTTAGCCGGTAAAATCATTTGGCCTTCTGATTCTCCCAAACCATTCATTCAATTCAACCCCAATGATGATGACGGTGTTTCATTGCTCATTGCAGAGTCTGATTCAGATTTCAACCATGTCATTGAAAACTCACCCCATGAAACTTCTTTGTCTCGTTCTTTTGTACCTCACTTAGATTCAACAGATTCTTTTGCTTCTGTTATCTCATGTCAAATAACCCTTTTTCCAAAAAGTGGTTTTTCTATTGGAATAAGCACACACCATGCTGTTTTTGATGGAAAATCTTCCACTATGTTCATCAAAGCTTGGGCTTATCTATGCAACAAACTCATTTTGCTGTCAAAGTTTGAACCAGTATTCGACAGAGAAATCATCAAAGATCAAAATGAGCTTGCTGATACATTCACAAATAACTGGATCGAAATCATGACCAAAATGTTCCCAAATGAAAAAGGTAACGAACGATGCTTGAAGATTTTACCTTTTCAACCAAAACTAGATGACTATGTTCGTGCTACATTCGAGCTCACACGAGAAAATTTGAGTGAGATAAAGCAAATGGTGTTATCCAAATGGGAAATATTTGATACAAATGAATCAAAGCCTCAAACACTATCATCTTTTATTCTCACTTGTGCTTATTCGCTCGTTTGTGTTGCAAAAGCGATTCACAAATATGAAAAGGAGAAAGAAAAGTTTGCTTTTGCATTTAGTGTAGATTGTAGAGCAAGGTTAGAGCCACCAATACCAAATAACTATTTTGGAAATTGTGTATGGGGACACTTTGTTGATGCAAAACCATCTGATTTCATAAAAGAAGATGGATTGTTTTTAGTTGCTAAAAGCATTCATGAGAAAATAGTGATGATAAACGAAAAGGGTGCTCTTCAAGGAACTAATGATGCATTTGATAAATATATTTCTATGACAAGTGAAGGAATTGAAATTATTGGAGTGGCAGGGTCTAATAGATTTGGTGTTTATGAAATTGATTTTGGTTGGGGAAGGCCAGAAAAGGTGGAGATAGTATCAATTGATAGAGGTTTAACCATTGGTCTGGCTGAGGGCAAAAATGGCAAAGGTGGAATTGAAGTTGGGTTGGTTCTTAATAAGCATGTCATGGATCTCTTTACTAAGAAATATATTCAAAGACTTCCTCTGTGTCACATGGCTTCCAACAACAATAACATTAAAATCCATGAACACGTCAAAGTTGTTCCCCCACCATCAACTCAAACAACAAAAACACTACCTCTCACTTTCTTTGACATATTTTGGCTAACGTTTCATCCGGTAGAAAGAATCTTCTTCTACACCCTCCCAAATTCACAATCACACCCTTCTTTCTTCTTTCAAAACATTGTTCCAAAACTCAAAACATCACTTTCTTTAACCCTTCAACACTTTCTCCCTTTAGCCGGTAAAATTATTTGGCCTTCCGATTCTCCCAAACCATTCATCCAATTCAATCCCAATGATGACGACGGTGTCTCTTTCCTCATTGTAGAGTCTGATTCAGATTTCAATCATGTCATTGAAAACTCACCCCATGAAGCTTCTTTGTCTCAATTATTTGTACCTAACTTAGAATCAACAGATTCTTTTGCTTCTATTATCTCAATTCAAGTAACCCTTTTTCCAAAAAGTGGTTTTTCCATTGGAATAAGCACACACCATGCTGTTCTCGATGGAAAATCATCAACTATGTTCATCAAAGCTTGGGCTTATCTATGCAGCAAAATCATTGAAACCGAAGAATTGCCAAGTTTGTTGCCAGAGTTAGAACCTTTATTCGAGAGGGAAATCATCAAAGATCAAAATGGACTTGGTGATGCATTCACAAATAAATGGTTCGAGATCAATGCCAAAATGTTCCCAAATGAAAAAAGAAACAAACAAAGCTTGAAGATTTTCCCTTTTGAACCAAAACTCAAAGACTATGTCCGAGCTACTTTTGAGCTCGGACGTGAAGATTTGAACAAGATAAAGCAAATGGTTTTATCGAAATGGGAAATATCCGAAACAAATGAAACAAAGCCTCAAACACTATCAACTTTTGTTCTCGCTTGTGCTTATTCGCTCGTTTGTTTTGCAAAAGCAATTAATGGAGTTGAAAAAGAGAAAGAGAAGTTTGTTATGGGGTTCAATGTAGATTGTAGAGCAAGGTTAGAGCCACGAATACCAAATAATTATTTTGGAAATTGTGTATGGGGACATATAGTTGATACAAAACCATTCGATTTCATAAAAGAAGATGCAGTATTTTTGGTTGCTAGGAGTATTCATGAGAAAATAAAGATGATTAATGAAAAGGGTGTTCTAGAAGGAGCTGAAAATTTATTTGATGATTTTATATCTATAATAAGTGAAGGATTTCAAATTATGGGATTAGCGGGGTCTAATAGATTTGGTGTTTATGAGATTGATTTTGGTTGGGGAAGGCCGGAAAAGGTGGAAATAGTGTCAGTTGATAGAGGTTTAACCATTGGTTTGGCTGATAGCAAAAATGGGAAAGGTGGTGTTGAAGTTGGCCTTGTTTTGAATGAACATGTAATGGATCTCTTTAGCACGTTGTTTTTTGAAGGACTTTGTGTTAATTGA 2841 0.3597 MASNNIKIHQQFKVVPLPSSTQTSTTPLTFFDIYWLRFHPVERIFFYTLPNSQSHPTFFYQNIVPRLKTSLSLTLQHFLPLAGKIIWPSDSPKPFIQFNPNDDDGVSLLIAESDSDFNHVIENSPHETSLSRSFVPHLDSTDSFASVISCQITLFPKSGFSIGISTHHAVFDGKSSTMFIKAWAYLCNKLILLSKFEPVFDREIIKDQNELADTFTNNWIEIMTKMFPNEKGNERCLKILPFQPKLDDYVRATFELTRENLSEIKQMVLSKWEIFDTNESKPQTLSSFILTCAYSLVCVAKAIHKYEKEKEKFAFAFSVDCRARLEPPIPNNYFGNCVWGHFVDAKPSDFIKEDGLFLVAKSIHEKIVMINEKGALQGTNDAFDKYISMTSEGIEIIGVAGSNRFGVYEIDFGWGRPEKVEIVSIDRGLTIGLAEGKNGKGGIEVGLVLNKHVMDLFTKKYIQRLPLCHMASNNNNIKIHEHVKVVPPPSTQTTKTLPLTFFDIFWLTFHPVERIFFYTLPNSQSHPSFFFQNIVPKLKTSLSLTLQHFLPLAGKIIWPSDSPKPFIQFNPNDDDGVSFLIVESDSDFNHVIENSPHEASLSQLFVPNLESTDSFASIISIQVTLFPKSGFSIGISTHHAVLDGKSSTMFIKAWAYLCSKIIETEELPSLLPELEPLFEREIIKDQNGLGDAFTNKWFEINAKMFPNEKRNKQSLKIFPFEPKLKDYVRATFELGREDLNKIKQMVLSKWEISETNETKPQTLSTFVLACAYSLVCFAKAINGVEKEKEKFVMGFNVDCRARLEPRIPNNYFGNCVWGHIVDTKPFDFIKEDAVFLVARSIHEKIKMINEKGVLEGAENLFDDFISIISEGFQIMGLAGSNRFGVYEIDFGWGRPEKVEIVSVDRGLTIGLADSKNGKGGVEVGLVLNEHVMDLFSTLFFEGLCVN* 947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3051 946 Gene3D - 723 944 IPR023213 -
Tpr6g3051 946 Gene3D - 246 466 IPR023213 -
Tpr6g3051 946 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 474 946 - -
Tpr6g3051 946 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 462 - -
Tpr6g3051 946 SUPERFAMILY CoA-dependent acyltransferases 760 911 - -
Tpr6g3051 946 PANTHER - 474 946 - -
Tpr6g3051 946 PANTHER - 1 462 - -
Tpr6g3051 946 SUPERFAMILY CoA-dependent acyltransferases 291 432 - -
Tpr6g3051 946 Pfam Transferase family 14 460 - -
Tpr6g3051 946 Pfam Transferase family 484 936 - -
Tpr6g3051 946 Gene3D - 5 230 IPR023213 -
Tpr6g3051 946 Gene3D - 476 708 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3051 Tpr-Chr6 33145488 33156301 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3051 489 941 Monolignol Biosynthesis Gene Families AT5G48930 24.249 6.66e-18 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3051 - - gmx:100815354 590.112