Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3050 ATGACCAAAATCATAGAAATTTTCAATGTATCACCATCTTCACAAGAACAATTACCATCACAAACATCACTTCCTCTCACCTTTTTTGACATACTATGGTTAAGATTACCACCTGTTCAAAGAATTTTCTTCTATGAATTTCCAAACCAACCCTCACTTTTCTTCAATACCCTTCTTCCAAAACTCAAAAAATCACTTTCTGTTACTCTTTATCACTTTTATCCTCTTTTGGGTCATCTCATTTGGCCTCGTGATTCTCACAAACCTATTATCAAACATGTTATAGGCAACACACTTTTGCTTACAGTAGCTGAATCTGATGCTGATTTCAATCATTTATCTGGTAATAATCTTAATGAAGCTTCACAAATTCATGATCTCTTACCTAGCTTGAATATTTCTCATGATCAAGCTTCTGTTTTGGCTCTTCAAGTTACCCTTTTTCCAAACTATGGTATTTCTATTGGTATTACTTCACATCATGCTGTTTTAGATGGTAAAACTTCAACTTCTTTTATCAAATCTTGGGCTTATTTATGTAATAAGCTTGAAATTGGAGAATCTGAATCACCCCTTTTGCCGGATGAATTTGTTCCTTTCTTTGATAGAAAAGTAATCAATGATCCAAATGGATTAGAGGCAAAATATGTGGGTGATTGGTTAAATCAAGGTGGAACAAACAATAGAAGCTTAATGGTTTGGGACCTTGAAGTTCCTGAAGGGTCAACTAGAGGATTGTTTCGGTTAACTCGGTTGGATATTGAAAAGCTTAAGGAATTTGTAGTGTCTAAACAAAAGGATAGGAATGAAAATAAGAAACTTCATTTGTCAACTTTTGTGGTATCTATTGCATATGCATGGGTATGCAGTCTGAAAGCAGGGGAAATTGAGAACAAAAATGTTATGCTGGCTGTGAATATTGATTGCAGGAATCGGTTGGATCAACCAATTCCTGCAACATATTTTGGAAATTGTATTGGAGCAAGAATGGCAACTGTTGAAACAAGTAGGTTATTGGGAGAAGATGGACTAATTGTGGCTATTGAAGTGATTAGTGAAGCTTTGGAAACTCTCAAAGATGGAGTTTTGAATGGAGCTGAAAATTGGTCTTCATGGTTACTTGAAGGTGTTGCCATTTCTGATGTCAAAACAATTGGTGCTGCTGGTTCACCTAAATTTGAGGTTTATAGTACTGATTTTGGTTTTGGAAAACCAAAGAAAGTTGAAATGGCTTCTATAGATAGAACTGGAGCTTTTTGTATTTCTGATACTAGAAATGGTGATGGTGTTGAGATAGGTTTTGTGTCTAAGAGAAAAGCAATTGAGGCATTTGCTGCTATTTTTTTCAAAGGCATTGCATATTGA 1365 0.3509 MTKIIEIFNVSPSSQEQLPSQTSLPLTFFDILWLRLPPVQRIFFYEFPNQPSLFFNTLLPKLKKSLSVTLYHFYPLLGHLIWPRDSHKPIIKHVIGNTLLLTVAESDADFNHLSGNNLNEASQIHDLLPSLNISHDQASVLALQVTLFPNYGISIGITSHHAVLDGKTSTSFIKSWAYLCNKLEIGESESPLLPDEFVPFFDRKVINDPNGLEAKYVGDWLNQGGTNNRSLMVWDLEVPEGSTRGLFRLTRLDIEKLKEFVVSKQKDRNENKKLHLSTFVVSIAYAWVCSLKAGEIENKNVMLAVNIDCRNRLDQPIPATYFGNCIGARMATVETSRLLGEDGLIVAIEVISEALETLKDGVLNGAENWSSWLLEGVAISDVKTIGAAGSPKFEVYSTDFGFGKPKKVEMASIDRTGAFCISDTRNGDGVEIGFVSKRKAIEAFAAIFFKGIAY* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3050 454 PANTHER - 3 453 - -
Tpr6g3050 454 Gene3D - 1 226 IPR023213 -
Tpr6g3050 454 Gene3D - 239 454 IPR023213 -
Tpr6g3050 454 Pfam Transferase family 16 444 - -
Tpr6g3050 454 PANTHER ACYLTRANSFERASE, PUTATIVE-RELATED 3 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3050 Tpr-Chr6 33141458 33143154 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3050 42 450 Monolignol Biosynthesis Gene Families AT5G48930 23.753 5.76e-22 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3050 - - mtr:MTR_7g014230 711.064